RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ALDH3A1P30838 453 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 HMGCLP35914 325 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 EIF2DP41214 584 aaKnown RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 SLC1A2P43004 574 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 MAGEA12P43365 314 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 RGRP47804 291 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 TTPAP49638 278 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 SUOXP51687 545 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 NEK3P51956 506 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZNF140P52738 457 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 PRKAA2P54646 552 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 RAB10P61026 200 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ASPHQ12797 758 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 RUNX3Q13761 415 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 BMPR2Q13873 1038 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 PDE1CQ14123 709 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 GALNT3Q14435 633 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 USP10Q14694 798 aaKnown RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 LRRC14Q15048 493 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 EIF4HQ15056 248 aaKnown RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 PDK4Q16654 411 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ITPRIPL2Q3MIP1 535 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 GPR33Q49SQ1 333 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 GLIPR1L2Q4G1C9 344 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 AARS2Q5JTZ9 985 aaKnown RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 GKAP1Q5VSY0 366 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 LYPLAL1Q5VWZ2 237 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZDHHC20Q5W0Z9 365 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ATG16L1Q676U5 607 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZNF470Q6ECI4 717 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 C22orf39Q6P5X5 142 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 BRAT1Q6PJG6 821 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 LVRNQ6Q4G3 990 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 AFTPHQ6ULP2 937 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 GDPD4Q6W3E5 623 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 CERS6Q6ZMG9 384 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 TPRG1Q6ZUI0 275 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 MTSS1LQ765P7 747 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 GET4Q7L5D6 327 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ERMP1Q7Z2K6 904 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 GLT6D1Q7Z4J2 308 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 DSG4Q86SJ6 1040 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZC3HC1Q86WB0 502 aaKnown RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 CAMK1DQ8IU85 385 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 CILP2Q8IUL8 1156 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 SUGP1Q8IWZ8 645 aaKnown RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 STK40Q8N2I9 435 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 CBARPQ8N350 705 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 TTC30BQ8N4P2 665 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 DCLK2Q8N568 766 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 NAT16Q8N8M0 369 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ANKS4BQ8N8V4 417 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 PHC3Q8NDX5 983 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 LPCAT1Q8NF37 534 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 OR4K2Q8NGD2 314 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 OR13J1Q8NGT2 312 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 TTC8Q8TAM2 541 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 GDAP1Q8TB36 358 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 RDH11Q8TC12 318 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 PIH1D2Q8WWB5 315 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 GAL3ST3Q96A11 431 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ELSPBP1Q96BH3 223 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 RSPRY1Q96DX4 576 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ASIC4Q96FT7 647 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 CDKN2AIPNLQ96HQ2 116 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 RPL10LQ96L21 214 aaKnown RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 TBATAQ96M53 351 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZNF778Q96MU6 729 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 LRRC3BQ96PB8 259 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZNF317Q96PQ6 595 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 LYSMD1Q96S90 227 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 PAIP2Q9BPZ3 127 aaKnown RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 SPOCK3Q9BQ16 436 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 HEPHQ9BQS7 1158 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 MCMBPQ9BTE3 642 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 PITPNM3Q9BZ71 974 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 GPR63Q9BZJ6 419 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 SLC13A1Q9BZW2 595 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 TM6SF2Q9BZW4 377 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 CDH19Q9H159 772 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ECT2Q9H8V3 914 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 POPDC3Q9HBV1 291 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 CYP4F12Q9HCS2 524 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 SNX15Q9NRS6 342 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 PCMTD2Q9NV79 361 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 INTS10Q9NVR2 710 aaKnown RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 ELOVL2Q9NXB9 296 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 DKK3Q9UBP4 350 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 SLC2A6Q9UGQ3 507 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 EVLQ9UI08 416 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 SLCO3A1Q9UIG8 710 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 MID2Q9UJV3 735 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 APPL1Q9UKG1 709 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 SLC39A10Q9ULF5 831 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 CLEC4EQ9ULY5 219 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 CYP8B1Q9UNU6 501 aa3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 MTO1Q9Y2Z2 717 aaKnown RBP3.96□□□□□ -1.78
HMGB1P37-201ENST00000439613 VWA7Q9Y334 891 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms