RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 UBR7Q8N806 425 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 KCTD13Q8WZ19 329 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 TAPBPLQ9BX59 468 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 ELAC1Q9H777 363 aaKnown RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 PNPLA8Q9NP80 782 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 GEMIN8Q9NWZ8 242 aaKnown RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 POLR3HQ9Y535 204 aaPredicted RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 SERPINB7O75635 380 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 MYBPC1Q00872 1141 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 IRF5Q13568 498 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 NOMO1Q15155 1222 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 FBXL22Q6P050 247 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 DEF8Q6ZN54 512 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 LRRTM4Q86VH4 590 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 DHFR2Q86XF0 187 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 PCDH20Q8N6Y1 951 aaKnown RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 OR10H5Q8NGA6 315 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.01□□□□□ -0.49
NEK1-201ENST00000439128 CFAP20Q9Y6A4 193 aaKnown RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 TEX28O15482 410 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 GIMD1P0DJR0 217 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 FCGR1AP12314 374 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 KCNE1P15382 129 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 CPN2P22792 545 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 ME2P23368 584 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 VIPR1P32241 457 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 TAF1AQ15573 450 aaPredicted RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 MYLK3Q32MK0 819 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 ARMC8Q8IUR7 673 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 FBXO30Q8TB52 745 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 STK32AQ8WU08 396 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 EPB41L4BQ9H329 900 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 RIBC2Q9H4K1 309 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 SQORQ9Y6N5 450 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 RGS5O15539 181 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 FAM20BO75063 409 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 TIPRLO75663 272 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 OTUD3Q5T2D3 398 aaPredicted RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 RNASEH2BQ5TBB1 312 aaKnown RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 SYPL2Q5VXT5 272 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 BRAT1Q6PJG6 821 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 MAMDC4Q6UXC1 1216 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 SCUBE1Q8IWY4 988 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 SIDT2Q8NBJ9 832 aaKnown RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 KCT2Q8NC54 265 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 OR2AP1Q8NGE2 309 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 MAPK15Q8TD08 544 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 PRICKLE1Q96MT3 831 aaPredicted RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 ZNF607Q96SK3 696 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 FNDC11Q9BVV2 318 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 REXO4Q9GZR2 422 aaKnown RBP12.01□□□□□ -0.49
NEK1-201ENST00000439128 FTSJ1Q9UET6 329 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
NEK1-201ENST00000439128 TRBC1P01850 177 aa12□□□□□ -0.49
NEK1-201ENST00000439128 CAPN1P07384 714 aa12□□□□□ -0.49
NEK1-201ENST00000439128 TYRP1P17643 537 aa12□□□□□ -0.49
NEK1-201ENST00000439128 CCNFP41002 786 aa12□□□□□ -0.49
NEK1-201ENST00000439128 CLCNKAP51800 687 aa12□□□□□ -0.49
NEK1-201ENST00000439128 CSTF1Q05048 431 aaKnown RBP12□□□□□ -0.49
NEK1-201ENST00000439128 C2orf80Q0P641 193 aa12□□□□□ -0.49
NEK1-201ENST00000439128 CLHC1Q8NHS4 586 aa12□□□□□ -0.49
NEK1-201ENST00000439128 APOLD1Q96LR9 279 aa12□□□□□ -0.49
NEK1-201ENST00000439128 HAPLN3Q96S86 360 aa12□□□□□ -0.49
NEK1-201ENST00000439128 C16orf70Q9BSU1 422 aa12□□□□□ -0.49
NEK1-201ENST00000439128 GPR62Q9BZJ7 368 aa12□□□□□ -0.49
NEK1-201ENST00000439128 ENOPH1Q9UHY7 261 aa12□□□□□ -0.49
NEK1-201ENST00000439128 TMEM98Q9Y2Y6 226 aa12□□□□□ -0.49
NEK1-201ENST00000439128 A0A0J9YVX5 310 aa12□□□□□ -0.49
NEK1-201ENST00000439128 ILVBLA1L0T0 632 aa12□□□□□ -0.49
NEK1-201ENST00000439128 BCLAF3A2AJT9 711 aaKnown RBP12□□□□□ -0.49
NEK1-201ENST00000439128 MAN1A2O60476 641 aa12□□□□□ -0.49
NEK1-201ENST00000439128 HNRNPLP14866 589 aaKnown RBP eCLIP12□□□□□ -0.49
NEK1-201ENST00000439128 NSG1P42857 185 aa12□□□□□ -0.49
NEK1-201ENST00000439128 MAPK12P53778 367 aa12□□□□□ -0.49
NEK1-201ENST00000439128 TAS2R41P59536 307 aa12□□□□□ -0.49
NEK1-201ENST00000439128 PTSQ03393 145 aa12□□□□□ -0.49
NEK1-201ENST00000439128 MEA1Q16626 185 aa12□□□□□ -0.49
NEK1-201ENST00000439128 MORN1Q5T089 497 aa12□□□□□ -0.49
NEK1-201ENST00000439128 CPTPQ5TA50 214 aa12□□□□□ -0.49
NEK1-201ENST00000439128 PLEKHA7Q6IQ23 1121 aa12□□□□□ -0.49
NEK1-201ENST00000439128 ZNF549Q6P9A3 640 aa12□□□□□ -0.49
NEK1-201ENST00000439128 TMEM156Q8N614 296 aa12□□□□□ -0.49
NEK1-201ENST00000439128 TXNDC5Q8NBS9 432 aaKnown RBP12□□□□□ -0.49
NEK1-201ENST00000439128 ZNF514Q96K75 400 aaPredicted RBP12□□□□□ -0.49
NEK1-201ENST00000439128 CDCA3Q99618 268 aaPredicted RBP12□□□□□ -0.49
NEK1-201ENST00000439128 SLC25A23Q9BV35 468 aa12□□□□□ -0.49
NEK1-201ENST00000439128 ADAMTS10Q9H324 1103 aa12□□□□□ -0.49
NEK1-201ENST00000439128 REEP1Q9H902 201 aa12□□□□□ -0.49
NEK1-201ENST00000439128 SNX15Q9NRS6 342 aa12□□□□□ -0.49
NEK1-201ENST00000439128 MTRRQ9UBK8 725 aa12□□□□□ -0.49
NEK1-201ENST00000439128 KCNK6Q9Y257 313 aa12□□□□□ -0.49
NEK1-201ENST00000439128 CLCA3PQ9Y6N3 262 aa12□□□□□ -0.49
NEK1-201ENST00000439128 STON1Q9Y6Q2 735 aa12□□□□□ -0.49
NEK1-201ENST00000439128 STK16O75716 305 aa12□□□□□ -0.49
NEK1-201ENST00000439128 BMP7P18075 431 aa12□□□□□ -0.49
NEK1-201ENST00000439128 TPP2P29144 1249 aaPredicted RBP12□□□□□ -0.49
NEK1-201ENST00000439128 PLA2G16P53816 162 aa12□□□□□ -0.49
NEK1-201ENST00000439128 NEK10Q6ZWH5 1172 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms