RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 OGNP20774 298 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 PIK3CGP48736 1102 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 FAM26DQ5JW98 314 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 OTUD3Q5T2D3 398 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 CCDC81Q6ZN84 652 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 HEATR4Q86WZ0 1026 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 CPNE9Q8IYJ1 553 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 TUBGCP5Q96RT8 1024 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 GPR22Q99680 433 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 WDR41Q9HAD4 459 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 TDP1Q9NUW8 608 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 WBP1LQ9NX94 342 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 ANKRD66B4E2M5 251 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 FKBP9O95302 570 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 NFATC1O95644 943 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 PABPC1P11940 636 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 CTGFP29279 349 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 UBE3AQ05086 875 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 TAZQ16635 292 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 RBM20Q5T481 1227 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 FKBP9P1Q75LS8 142 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 RTN4RL1Q86UN2 441 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 SERPINA9Q86WD7 417 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 PHACTR4Q8IZ21 702 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 CXorf40AQ8TE69 158 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 SELENOMQ8WWX9 145 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 OVCA2Q8WZ82 227 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 OR8D1Q8WZ84 308 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 MTFMTQ96DP5 389 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 KLHL32Q96NJ5 620 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 IL12RB2Q99665 862 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 MOCS1Q9NZB8 636 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 SNX5Q9Y5X3 404 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 KLHL33A6NCF5 533 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 SYNDIG1LA6NDD5 238 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 VPS4BO75351 444 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 ALPIP09923 528 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 LINC00032P0C843 101 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 ACADMP11310 421 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 MAPK1P28482 360 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 RPS6KA3P51812 740 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 TSNQ15631 228 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 CPSF6Q16630 551 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 PGS1Q32NB8 556 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 C11orf96Q7Z7L8 435 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 HOMEZQ8IX15 550 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 KIAA2013Q8IYS2 634 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 FAM9CQ8IZT9 166 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 PHF12Q96QT6 1004 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 TDRKHQ9Y2W6 561 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 PTPRZ1P23471 2315 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 LTBP1Q14766 1721 aa11.5□□□□□ -0.57
TRAPPC9-202ENST00000438773 MGAT4DA6NG13 374 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 UBXN8O00124 270 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 KDELR3O43731 214 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 MAGEC1O60732 1142 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 SORBS2O94875 1100 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 FYNP06241 537 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 CHRNGP07510 517 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 PSMC3P17980 439 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 CAP1Q01518 475 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 GPM6BQ13491 265 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 CES4AQ5XG92 561 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 RD3Q7Z3Z2 195 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 TMEM135Q86UB9 458 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 FAM162AQ96A26 154 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 RCN3Q96D15 328 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 IMP4Q96G21 291 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 VPS50Q96JG6 964 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 TLR9Q9NR96 1032 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 RAD18Q9NS91 495 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 PPM1HQ9ULR3 514 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 KPNA5O15131 536 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 SIN3BO75182 1162 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 ULK1O75385 1050 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 PIK3R1P27986 724 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 WASP42768 502 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 DGKGP49619 791 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 RAP1GDS1P52306 607 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 DEFB103AP81534 67 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 ABRQ12979 859 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 KLF10Q13118 480 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 NEDD8Q15843 81 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 SPDYE7PQ495Y7 208 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 TXNDC11Q6PKC3 985 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 GRASPQ7Z6J2 395 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 CMTR2Q8IYT2 770 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 ESAMQ96AP7 390 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 MRGPRX2Q96LB1 330 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 PSKH2Q96QS6 385 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 EBF4Q9BQW3 602 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 TMEM79Q9BSE2 394 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 FAM83DQ9H4H8 585 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 CD84Q9UIB8 345 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 PNMA8BQ9ULN7 279 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 CCDC154A6NI56 674 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 FAM155AB1AL88 458 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 ADAM12O43184 909 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 ESR1P03372 595 aa11.49□□□□□ -0.57
TRAPPC9-202ENST00000438773 SNRPB2P08579 225 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms