RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 DCAF7P61962 342 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 POU3F1Q03052 451 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 CEBPZQ03701 1054 aaKnown RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 HIST2H2ACQ16777 129 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 IZUMO4Q1ZYL8 232 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 FAM69BQ5VUD6 431 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 TXNDC8Q6A555 127 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 HIST2H2BCQ6DN03 193 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 HIST2H2BDQ6DRA6 164 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 WBP2NLQ6ICG8 309 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 TSSK4Q6SA08 328 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 LCTLQ6UWM7 567 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 C4orf50Q6ZRC1 276 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 Q7L0L9 218 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 PXKQ7Z7A4 578 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 DENND6AQ8IWF6 608 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 MB21D2Q8IYB1 491 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 CCDC13Q8IYE1 715 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 TRIB2Q92519 343 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 GTF3C6Q969F1 213 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 INTS12Q96CB8 462 aaKnown RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 WDFY2Q96P53 400 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 PKP4Q99569 1192 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 H2AFJQ9BTM1 129 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 FTOQ9C0B1 505 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 TKTL2Q9H0I9 626 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 KIF9Q9HAQ2 790 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 PLEKHA5Q9HAU0 1116 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 MAGEE1Q9HCI5 957 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 PLSCR4Q9NRQ2 329 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 SLC6A13Q9NSD5 602 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 TMEM51Q9NW97 253 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 CISD1Q9NZ45 108 aaKnown RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 LIMA1Q9UHB6 759 aaKnown RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 INTS6Q9UL03 887 aaKnown RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 CORO1CQ9ULV4 474 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 LSM4Q9Y4Z0 139 aaKnown RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 KCNE2Q9Y6J6 123 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 A3GALT2U3KPV4 340 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 RPGRIP1LQ68CZ1 1315 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 ITIH6Q6UXX5 1313 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 E9PCH4 1651 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 ANKRD36BQ8N2N9 1353 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 YTHDC2Q9H6S0 1430 aaKnown RBP3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 RGPD8O14715 1765 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 IGLV5-37A0A075B6J1 123 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 CPED1A4D0V7 1026 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 LINC01553A4QN01 128 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 TTC36A6NLP5 189 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 SEC14L5O43304 696 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 TIPRLO75663 272 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 RNASEH2AO75792 299 aaKnown RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 SEC14L2O76054 403 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 CELF2O95319 508 aaKnown RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 MT-CYBP00156 380 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 SNRNP70P08621 437 aaKnown RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 ETFAP13804 333 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 C21orf33P30042 268 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 ARL1P40616 181 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 RPL7AP62424 266 aaKnown RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 OLR1P78380 273 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 SORDQ00796 357 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 GOLGA8DPQ0D2H9 430 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 FGFBP1Q14512 234 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 TCTN1Q2MV58 587 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 ALG11Q2TAA5 492 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 SNX30Q5VWJ9 437 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 HAPLN4Q86UW8 402 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 FRMD1Q8N878 549 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 LILRB1Q8NHL6 650 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 ARRDC2Q8TBH0 407 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 PSPC1Q8WXF1 523 aaKnown RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 ERGIC1Q969X5 290 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 LRFN5Q96NI6 719 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 ZNF570Q96NI8 536 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 SDF4Q9BRK5 362 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 VPS33BQ9H267 617 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 EIF2B3Q9NR50 452 aaKnown RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 SMYD2Q9NRG4 433 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 CYSLTR2Q9NS75 346 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 DIAPH3Q9NSV4 1193 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 RNF186Q9NXI6 227 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 MAP3K20Q9NYL2 800 aaKnown RBP3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 TIAM2Q8IVF5 1701 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 NUP155O75694 1391 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 PALLDQ8WX93 1383 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 A0A0C4DFX4 3053 aa3.35□□□□□ -1.87
HMGB3P12-201ENST00000438745 TRIOBPQ9H2D6 2365 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 A0A087WYN8 130 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 A0A0U1RQF3 1178 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 FSD2A1L4K1 749 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 PRSS47A8MTI9 375 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 USP17L23D6RBM5 183 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 AP3D1O14617 1153 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 TIMM23O14925 209 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 KLK8O60259 260 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 LDB3O75112 727 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 ZBED4O75132 1171 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 GAGE7O76087 117 aa3.34□□□□□ -1.87
HMGB3P12-201ENST00000438745 MTA2O94776 668 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms