RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 RB1P06400 928 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 HOXA13P31271 388 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 UBA7P41226 1012 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 EPS8Q12929 822 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 AIMP2Q13155 320 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 IRF3Q14653 427 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 DECR1Q16698 335 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 KCNT1Q5JUK3 1230 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 CAPRIN2Q6IMN6 1127 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 BEST3Q8N1M1 668 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 RBMXL3Q8N7X1 1067 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 KCNH5Q8NCM2 988 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 LMO3Q8TAP4 145 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 APBB2Q92870 758 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 TAAR8Q969N4 342 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 JAKMIP2Q96AA8 810 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 MOAP1Q96BY2 351 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 TMEM19Q96HH6 336 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 GRAMD2BQ96HH9 432 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 IGSF21Q96ID5 467 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 CTAGE1Q96RT6 745 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 SLCO5A1Q9H2Y9 848 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 SEBOXQ9HB31 216 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 NKIRAS2Q9NYR9 191 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 STK39Q9UEW8 545 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 VDAC3Q9Y277 283 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 R3HDM2Q9Y2K5 976 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 SNX8Q9Y5X2 465 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 CLIC4Q9Y696 253 aa3.63□□□□□ -1.83
TRAPPC13-204ENST00000438419 DENND3A2RUS2 1198 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 SYNDIG1LA6NDD5 238 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 A8MV72 311 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 H3BQ06 376 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 MAP2K7O14733 419 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 ATP2A1O14983 1001 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 P4HA2O15460 535 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 HS6ST1O60243 411 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 HIST1H2ABP04908 130 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 SRPRAP08240 638 aaKnown RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 GABRB1P18505 474 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 HIST1H2ADP20671 130 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 USP8P40818 1118 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 EIF2DP41214 584 aaKnown RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 TMPOP42166 694 aaKnown RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 MRPL12P52815 198 aaKnown RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 TAS2R38P59533 333 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 PSMC6P62333 389 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 STK4Q13043 487 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 BECN1Q14457 450 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 ASTE1Q2TB18 679 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 MYLK3Q32MK0 819 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 ZNF805Q5CZA5 627 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 RAB41Q5JT25 222 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 LRIF1Q5T3J3 769 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 KIAA0930Q6ICG6 404 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 BRAT1Q6PJG6 821 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 CLEC17AQ6ZS10 378 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 HIST3H2AQ7L7L0 130 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 ARMC9Q7Z3E5 817 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 TSPAN33Q86UF1 283 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 LSMEM1Q8N8F7 131 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 OR1J2Q8NGS2 313 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 TRPC4APQ8TEL6 797 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 SNRNP27Q8WVK2 155 aaKnown RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 DNAAF4Q8WXU2 420 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 SAT2Q96F10 170 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 ELMOD3Q96FG2 381 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 FEM1CQ96JP0 617 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 FAM84BQ96KN1 310 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 QRFPRQ96P65 431 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 MTERF1Q99551 399 aaKnown RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 SLF1Q9BQI6 1058 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 SRSF8Q9BRL6 282 aaKnown RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 C1QTNF1Q9BXJ1 281 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 DDX31Q9H8H2 851 aaKnown RBP3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 OGFRQ9NZT2 677 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 MALT1Q9UDY8 824 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 FBXL17Q9UF56 701 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 NENFQ9UMX5 172 aa3.62□□□□□ -1.83
TRAPPC13-204ENST00000438419 EME2A4GXA9 379 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 CDRT15L2A8MXV6 281 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 CTDSP2O14595 271 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 OGG1O15527 345 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 GPC4O75487 556 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 S1PR1P21453 382 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 NNMTP40261 264 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 CAMPP49913 170 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 PDE1BQ01064 536 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 SREBF2Q12772 1141 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 IKQ13123 557 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 PLEKHS1Q5SXH7 462 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 PMS2CLQ68D20 193 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 ZNF280DQ6N043 979 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 TRNP1Q6NT89 227 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 PRSS57Q6UWY2 283 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 SDCCAG8Q86SQ7 713 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 GPR180Q86V85 440 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 SFR1Q86XK3 245 aa3.61□□□□□ -1.83
TRAPPC13-204ENST00000438419 NRROSQ86YC3 692 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms