RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 WDR75Q8IWA0 830 aaKnown RBP20.96■□□□□ 0.95
PTPRF-207ENST00000436724 CLDN19Q8N6F1 224 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 GIMAP7Q8NHV1 300 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 FGF14Q92915 247 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 EXT2Q93063 718 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 PBXIP1Q96AQ6 731 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 SLC7A6OSQ96CW6 309 aaPredicted RBP20.96■□□□□ 0.95
PTPRF-207ENST00000436724 ERLEC1Q96DZ1 483 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 PHF21BQ96EK2 531 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 RPP25Q9BUL9 199 aaKnown RBP20.96■□□□□ 0.95
PTPRF-207ENST00000436724 P2RY12Q9H244 342 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 SARS2Q9NP81 518 aaKnown RBP20.96■□□□□ 0.95
PTPRF-207ENST00000436724 IKZF3Q9UKT9 509 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 TMEM114B3SHH9 223 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 C1SP09871 688 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 CHRM3P20309 590 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 ITGALP20701 1170 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 ATP5F1P24539 256 aaPredicted RBP20.96■□□□□ 0.95
PTPRF-207ENST00000436724 POLR2LP62875 67 aaKnown RBP20.96■□□□□ 0.95
PTPRF-207ENST00000436724 ILF2Q12905 390 aaKnown RBP20.96■□□□□ 0.95
PTPRF-207ENST00000436724 PDGFRLQ15198 375 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 OR4D1Q15615 310 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 VWA5B1Q5TIE3 1220 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 BRAT1Q6PJG6 821 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 PARM1Q6UWI2 310 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 TTC7BQ86TV6 843 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 TMEM237Q96Q45 408 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 DRC3Q9H069 523 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 EBF2Q9HAK2 575 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 CD84Q9UIB8 345 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 OAS3Q9Y6K5 1087 aaKnown RBP20.96■□□□□ 0.95
PTPRF-207ENST00000436724 TCF20Q9UGU0 1960 aaKnown RBP20.95■□□□□ 0.94
PTPRF-207ENST00000436724 MPSTP25325 297 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 METAP1P53582 386 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 TRIM67Q6ZTA4 783 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.95■□□□□ 0.94
PTPRF-207ENST00000436724 SKA1Q96BD8 255 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 S1PR5Q9H228 398 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 ZFP69BQ9UJL9 534 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 SARDHQ9UL12 918 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 PRMT5O14744 637 aaPredicted RBP20.95■□□□□ 0.94
PTPRF-207ENST00000436724 H2AFYO75367 372 aaKnown RBP20.95■□□□□ 0.94
PTPRF-207ENST00000436724 VPS26AO75436 327 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 ZBTB16Q05516 673 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 RUNX3Q13761 415 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 FNDC3BQ53EP0 1204 aaKnown RBP20.95■□□□□ 0.94
PTPRF-207ENST00000436724 CERS6Q6ZMG9 384 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 CLNKQ7Z7G1 428 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 LSMEM2Q8N112 164 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 CBARPQ8N350 705 aaPredicted RBP20.95■□□□□ 0.94
PTPRF-207ENST00000436724 CD200R1Q8TD46 325 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 CHFRQ96EP1 664 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 CRLS1Q9UJA2 301 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 PRSS21Q9Y6M0 314 aa20.95■□□□□ 0.94
PTPRF-207ENST00000436724 BRWD1Q9NSI6 2320 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 TRBV5-4A0A0C4DH59 114 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 E5RI56 91 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 IPO13O94829 963 aaKnown RBP20.94■□□□□ 0.94
PTPRF-207ENST00000436724 ESR1P03372 595 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 TIMP2P16035 220 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 CCND1P24385 295 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 ACRV1P26436 265 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 GJA4P35212 333 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 OPRD1P41143 372 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 ADARP55265 1226 aaKnown RBP20.94■□□□□ 0.94
PTPRF-207ENST00000436724 RCN2Q14257 317 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 CES5AQ6NT32 575 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 STK40Q8N2I9 435 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 PHTF2Q8N3S3 785 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 TERB1Q8NA31 727 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 SYTL2Q9HCH5 934 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 PCDH12Q9NPG4 1184 aa20.94■□□□□ 0.94
PTPRF-207ENST00000436724 ZNF195O14628 629 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 ITGB6P18564 788 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 ATP13A5Q4VNC0 1218 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 SPDYAQ5MJ70 313 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 KCNJ9Q92806 393 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 INPP5DQ92835 1189 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 RAB3IPQ96QF0 476 aaPredicted RBP20.93■□□□□ 0.94
PTPRF-207ENST00000436724 C19orf43Q9BQ61 176 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 NMUR2Q9GZQ4 415 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 YY1AP1Q9H869 796 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 NCKIPSDQ9NZQ3 722 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 TRMT6Q9UJA5 497 aaKnown RBP20.93■□□□□ 0.94
PTPRF-207ENST00000436724 TBC1D3BA6NDS4 549 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 CBX6O95503 412 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 ANP32DO95626 131 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 PYGLP06737 847 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 LAMP2P13473 410 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 SPINT3P49223 89 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 VASPP50552 380 aaPredicted RBP20.93■□□□□ 0.94
PTPRF-207ENST00000436724 PRKAA2P54646 552 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 ARHGEF7Q14155 803 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 ZNF234Q14588 700 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 ZNF805Q5CZA5 627 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 TLDC1Q6P9B6 456 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 YAF2Q8IY57 180 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 CPNE9Q8IYJ1 553 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 EEF1AKMT1Q8WVE0 214 aa20.93■□□□□ 0.94
PTPRF-207ENST00000436724 RILPQ96NA2 401 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms