RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 TSPAN17Q96FV3 270 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 CORO1BQ9BR76 489 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 PTTG2Q9NZH5 202 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 THEGQ9P2T0 379 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 HSFX1Q9UBD0 423 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 TRMT6Q9UJA5 497 aaKnown RBP15.48■□□□□ 0.07
SCARF1-203ENST00000434376 DOLKQ9UPQ8 538 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 USP22Q9UPT9 525 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 TMEM114B3SHH9 223 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 CCNT2O60583 730 aaKnown RBP15.48■□□□□ 0.07
SCARF1-203ENST00000434376 RPP40O75818 363 aaKnown RBP15.48■□□□□ 0.07
SCARF1-203ENST00000434376 RBP1P09455 135 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 TFPTP0C1Z6 253 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 SMIM18P0DKX4 95 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 CKMT2P17540 419 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 GRIA3P42263 894 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 VEPH1Q14D04 833 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 TMEM39AQ9NV64 488 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 SCN4AP35499 1836 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 TIPRLO75663 272 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 TNFAIP8O95379 198 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 NDST3O95803 873 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 KPNA2P52292 529 aaKnown RBP15.47■□□□□ 0.07
SCARF1-203ENST00000434376 C6orf10Q5SRN2 563 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 CMTM8Q8IZV2 173 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 OR52B6Q8NGF0 335 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 YME1L1Q96TA2 773 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 SEPHS2Q99611 448 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 SIKE1Q9BRV8 207 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 ZFP14Q9HCL3 533 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 YIPF1Q9Y548 306 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 BOLA2-SMG1P6H3BVE0 249 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 AKAP10O43572 662 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 CDK14O94921 469 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 OR4F21O95013 312 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 MAGEA12P43365 314 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 SH3BGRP55822 239 aaPredicted RBP15.47■□□□□ 0.07
SCARF1-203ENST00000434376 ZXDBP98169 803 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 CDKL1Q00532 357 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 TMEM259Q4ZIN3 620 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 UNC50Q53HI1 259 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 MTX3Q5HYI7 312 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 IL23RQ5VWK5 629 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 TWIST2Q8WVJ9 160 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 SORCS1Q8WY21 1168 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 C19orf60Q96EN9 201 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 SERPINI1Q99574 410 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 CIB1Q99828 191 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 VN1R3Q9BXE9 311 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 C1orf21Q9H246 121 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 TAS2R13Q9NYV9 303 aa15.47■□□□□ 0.07
SCARF1-203ENST00000434376 A0A087X1B8 175 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 TRMUO75648 421 aaKnown RBP15.46■□□□□ 0.07
SCARF1-203ENST00000434376 CLDN7O95471 211 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 CDK4P11802 303 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 CSF2RAP15509 400 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 ME2P23368 584 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 DCTN2Q13561 401 aaKnown RBP15.46■□□□□ 0.07
SCARF1-203ENST00000434376 TIGD2Q4W5G0 525 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 LPCAT2Q7L5N7 544 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 RALGPS2Q86X27 583 aaPredicted RBP15.46■□□□□ 0.07
SCARF1-203ENST00000434376 MYO1HQ8N1T3 1032 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 AFAP1L2Q8N4X5 818 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 GABPB2Q8TAK5 448 aaPredicted RBP15.46■□□□□ 0.07
SCARF1-203ENST00000434376 BRSK1Q8TDC3 778 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 NCSTNQ92542 709 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 ASIC4Q96FT7 647 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 TMEM74Q96NL1 305 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 PKP2Q99959 881 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 HGH1Q9BTY7 390 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 PSMD13Q9UNM6 376 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 DNAJC15Q9Y5T4 150 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 AP3B1O00203 1094 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 ECI2O75521 394 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 MTHFD1P11586 935 aaKnown RBP15.46■□□□□ 0.07
SCARF1-203ENST00000434376 ZNF37AP17032 561 aaPredicted RBP15.46■□□□□ 0.07
SCARF1-203ENST00000434376 STT3AP46977 705 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 CCR3P51677 355 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 MYBPC1Q00872 1141 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 EIF4EBP2Q13542 120 aaPredicted RBP15.46■□□□□ 0.07
SCARF1-203ENST00000434376 PARP15Q460N3 678 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 MIER2Q8N344 545 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 LMNTD1Q8N9Z9 388 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 OR10Q1Q8NGQ4 319 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 LRTOMTQ8WZ04 291 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 LPGAT1Q92604 370 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 GFM2Q969S9 779 aaKnown RBP15.46■□□□□ 0.07
SCARF1-203ENST00000434376 PYCR2Q96C36 320 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 ASB8Q9H765 288 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 EML4Q9HC35 981 aaKnown RBP15.46■□□□□ 0.07
SCARF1-203ENST00000434376 HCFC1R1Q9NWW0 138 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 SLAMF8Q9P0V8 285 aa15.46■□□□□ 0.07
SCARF1-203ENST00000434376 TCAF2A6NFQ2 919 aa15.46■□□□□ 0.06
SCARF1-203ENST00000434376 H3BNX3 289 aa15.46■□□□□ 0.06
SCARF1-203ENST00000434376 CCL16O15467 120 aa15.46■□□□□ 0.06
SCARF1-203ENST00000434376 EFNA1P20827 205 aaPredicted RBP15.46■□□□□ 0.06
SCARF1-203ENST00000434376 CA5AP35218 305 aa15.46■□□□□ 0.06
SCARF1-203ENST00000434376 CTSOP43234 321 aaPredicted RBP15.46■□□□□ 0.06
SCARF1-203ENST00000434376 LEPRP48357 1165 aaKnown RBP15.46■□□□□ 0.06
SCARF1-203ENST00000434376 PSMD7P51665 324 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms