RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 HLA-DQB2P05538 268 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 H2AFZP0C0S5 128 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 ANKRD34CP0C6C1 535 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 LIFP15018 202 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 NOP2P46087 812 aaKnown RBP13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 CCR10P46092 362 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 PPM1FP49593 454 aaPredicted RBP13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 UBASH3AP57075 661 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 DCDC1P59894 354 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 CYP4F2P78329 520 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 IFI35P80217 286 aaPredicted RBP13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 FANCCQ00597 558 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 NIPAL4Q0D2K0 466 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 ABHD18Q0P651 414 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 QPCTQ16769 361 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 ANKS6Q68DC2 871 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 H2AFVQ71UI9 128 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 PLXDC1Q8IUK5 500 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 PHYKPLQ8IUZ5 450 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 CCNYQ8ND76 341 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 JPH3Q8WXH2 748 aaPredicted RBP13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 PMEPA1Q969W9 287 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 RTP4Q96DX8 246 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 SMIM14Q96QK8 99 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 SRPK1Q96SB4 655 aaKnown RBP13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 ZSCAN5AQ9BUG6 496 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 XPO4Q9C0E2 1151 aaKnown RBP13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 TMEM9Q9P0T7 183 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 CTTNBP2NLQ9P2B4 639 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 TBC1D29Q9UFV1 150 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 TMEM184BQ9Y519 407 aaPredicted RBP13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 OAS3Q9Y6K5 1087 aaKnown RBP13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 PTPN13Q12923 2485 aa13.41□□□□□ -0.26
GCSHP3-201ENST00000431120 TRBV23OR9-2A0A075B6M9 112 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 FADS2P1A8MWK0 482 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 TOX3O15405 576 aaPredicted RBP13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 ARHGAP6O43182 974 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 GRID2O43424 1007 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 EML2O95834 649 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 ACP5P13686 325 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 MPSTP25325 297 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 HNRNPH3P31942 346 aaKnown RBP13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 MC1RQ01726 317 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 GBE1Q04446 702 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 PPIDQ08752 370 aaKnown RBP13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 MAP7Q14244 749 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 CLCA4Q14CN2 919 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 SLC14A2Q15849 920 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 ATP13A4Q4VNC1 1196 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 CAVIN1Q6NZI2 390 aaKnown RBP13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 PQLC3Q8N755 202 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 NCSTNQ92542 709 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 RNF157Q96PX1 679 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 GPN2Q9H9Y4 310 aaPredicted RBP13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 ZFYVE1Q9HBF4 777 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 MAGEE1Q9HCI5 957 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 TRIM39Q9HCM9 518 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 DTLQ9NZJ0 730 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 CPNE7Q9UBL6 633 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 NENFQ9UMX5 172 aa13.4□□□□□ -0.26
GCSHP3-201ENST00000431120 MN1Q10571 1320 aaPredicted RBP13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 UBR5O95071 2799 aaPredicted RBP13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 JCHAINP01591 159 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 MMP2P08253 660 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 XRCC1P18887 633 aaPredicted RBP13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 KDELR1P24390 212 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 CD86P42081 329 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 POLE2P56282 527 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 SLC10A2Q12908 348 aaPredicted RBP13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 KCNAB2Q13303 367 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 NFATC2Q13469 925 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 ZNF569Q5MCW4 686 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 ZNF761Q86XN6 746 aaPredicted RBP13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 CPLX3Q8WVH0 158 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 BRD8Q9H0E9 1235 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 ANAPC2Q9UJX6 822 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 KCNK6Q9Y257 313 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 ADGRG1Q9Y653 693 aa13.39□□□□□ -0.27
GCSHP3-201ENST00000431120 CHUKO15111 745 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 POLR1CO15160 346 aaPredicted RBP13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 VEGFDO43915 354 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 MTA2O94776 668 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 SLC25A14O95258 325 aaPredicted RBP13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 C9P02748 559 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 TPM3P06753 285 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 ZFXP17010 805 aaPredicted RBP13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 UBE2IP63279 158 aaKnown RBP13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 PDK1Q15118 436 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 SLC18A3Q16572 532 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 SNAP47Q5SQN1 464 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 ZFYVE27Q5T4F4 411 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 RBM12BQ8IXT5 1001 aaKnown RBP13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 TRAM1L1Q8N609 369 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 ESX1Q8N693 406 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 CNTD1Q8N815 330 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 TIMM29Q9BSF4 260 aa13.38□□□□□ -0.27
GCSHP3-201ENST00000431120 SPATA16Q9BXB7 569 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms