RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 USP3Q9Y6I4 520 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 GPIP06744 558 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 ANXA6P08133 673 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 FUT4P22083 530 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 AIF1P55008 147 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 TGFBIQ15582 683 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 AP5B1Q2VPB7 878 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 DUSP28Q4G0W2 176 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 PABPC1LQ4VXU2 614 aaKnown RBP13.66□□□□□ -0.22
SGMS1-203ENST00000429490 UNC50Q53HI1 259 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 INTS6LQ5JSJ4 861 aaKnown RBP13.66□□□□□ -0.22
SGMS1-203ENST00000429490 TMEM126BQ8IUX1 230 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 LGI2Q8N0V4 545 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 TERB1Q8NA31 727 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 TMBIM1Q969X1 311 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 TAMM41Q96BW9 452 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 BIRC7Q96CA5 298 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 MRGPRX2Q96LB1 330 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 SERPINB11Q96P15 392 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 TMEM209Q96SK2 561 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 PARVBQ9HBI1 364 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 SLAMF8Q9P0V8 285 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 ACTR3BQ9P1U1 418 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 XYLBO75191 536 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 CNTN5O94779 1100 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 MYCP01106 439 aaPredicted RBP13.66□□□□□ -0.22
SGMS1-203ENST00000429490 WARSP23381 471 aaKnown RBP13.66□□□□□ -0.22
SGMS1-203ENST00000429490 MRPS15P82914 257 aaKnown RBP13.66□□□□□ -0.22
SGMS1-203ENST00000429490 PLA2G4EQ3MJ16 856 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 GPR180Q86V85 440 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 CILP2Q8IUL8 1156 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 CCDC117Q8IWD4 279 aaPredicted RBP13.66□□□□□ -0.22
SGMS1-203ENST00000429490 MFSD6LQ8IWD5 586 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 SYTL1Q8IYJ3 562 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 TMEM86AQ8N2M4 240 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 SOCS7O14512 581 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 CAPN1P07384 714 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 GRK4P32298 578 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 KCNC1P48547 511 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 TUBA4AP68366 448 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 DNASE1L3Q13609 305 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 CPSF6Q16630 551 aaKnown RBP eCLIP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 EFL1Q7Z2Z2 1120 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 ATAD1Q8NBU5 361 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 SMG8Q8ND04 991 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 ZYG11BQ9C0D3 744 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 AMBNQ9NP70 447 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 CMTM6Q9NX76 183 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 MARCH2Q9P0N8 246 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 HSFX1Q9UBD0 423 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 PCDHGC4Q9Y5F7 938 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 SHROOM3Q8TF72 1996 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 RGS5O15539 181 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 NIPSNAP2O75323 286 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 CPSF4O95639 269 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 STAU1O95793 577 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 ALDOCP09972 364 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 HAPLN1P10915 354 aaPredicted RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 AXLP30530 894 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 CYP4F2P78329 520 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 TXNL4AP83876 142 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 CYP4F3Q08477 520 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 C16orf59Q7L2K0 433 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 HS3ST5Q8IZT8 346 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 TFAP2CQ92754 450 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 C1QTNF1Q9BXJ1 281 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 UGT2B28Q9BY64 529 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 ACTR8Q9H981 624 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 GDAP2Q9NXN4 497 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 IQCF5A8MTL0 148 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 H3BMQ9 156 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 IRAK2O43187 625 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 FAM20BO75063 409 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 SBK3P0C264 359 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 DBTP11182 482 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 SFSWAPQ12872 951 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 CYP2A13Q16696 494 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 ZNF829Q3KNS6 432 aaPredicted RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 SIRPB2Q5JXA9 342 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 HMBOX1Q6NT76 420 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 PIWIL3Q7Z3Z3 882 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 R3HCC1LQ7Z5L2 792 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 PLEKHH3Q7Z736 793 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 DCP1BQ8IZD4 617 aaKnown RBP13.65□□□□□ -0.22
SGMS1-203ENST00000429490 OR6K2Q8NGY2 324 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 SNX19Q92543 992 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 PTERQ96BW5 349 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 TPD52L3Q96J77 140 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 COG8Q96MW5 612 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 ANKRD60Q9BZ19 345 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 IGSF5Q9NSI5 407 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 PTCH2Q9Y6C5 1203 aa13.65□□□□□ -0.22
SGMS1-203ENST00000429490 A0A0U1RQS6 177 aa13.64□□□□□ -0.23
SGMS1-203ENST00000429490 SEC24AO95486 1093 aa13.64□□□□□ -0.23
SGMS1-203ENST00000429490 FADS2O95864 444 aaKnown RBP13.64□□□□□ -0.23
SGMS1-203ENST00000429490 FYNP06241 537 aa13.64□□□□□ -0.23
SGMS1-203ENST00000429490 IMPDH2P12268 514 aa13.64□□□□□ -0.23
SGMS1-203ENST00000429490 EFNA1P20827 205 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms