RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PIANPQ8IYJ0 282 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 TCEAL8Q8IYN2 117 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 ADCY4Q8NFM4 1077 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 OR56A4Q8NGH8 313 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 CD200R1Q8TD46 325 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 ZNF483Q8TF39 744 aaPredicted RBP13.59□□□□□ -0.23
THBS3-202ENST00000428962 WBP2Q969T9 261 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 TUBGCP3Q96CW5 907 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 LINGO1Q96FE5 620 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 DCUN1D1Q96GG9 259 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 ZFRQ96KR1 1074 aaKnown RBP13.59□□□□□ -0.23
THBS3-202ENST00000428962 NSUN5Q96P11 429 aaKnown RBP13.59□□□□□ -0.23
THBS3-202ENST00000428962 CCT7Q99832 543 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 C19orf43Q9BQ61 176 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 C2orf49Q9BVC5 232 aaPredicted RBP13.59□□□□□ -0.23
THBS3-202ENST00000428962 GPR63Q9BZJ6 419 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 RNF208Q9H0X6 261 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 MAGEE1Q9HCI5 957 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 VPS51Q9UID3 782 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 RIMS3Q9UJD0 308 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 A0A0J9YYE9 177 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 PRSS51A0A1B0GVH4 220 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 LRRC14BA6NHZ5 514 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 CDC7O00311 574 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 FZD6O60353 706 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 NIPSNAP2O75323 286 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 MATN4O95460 622 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 C8BP07358 591 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 ARSAP15289 507 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 VCLP18206 1134 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 TCN1P20061 433 aaPredicted RBP13.58□□□□□ -0.24
THBS3-202ENST00000428962 CHRM3P20309 590 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 CSKP41240 450 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 CDKN1CP49918 316 aaPredicted RBP13.58□□□□□ -0.24
THBS3-202ENST00000428962 RPS6KA2Q15349 733 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 COQ5Q5HYK3 327 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 OR52E8Q6IFG1 317 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 OGFOD2Q6N063 350 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 C8orf82Q6P1X6 216 aaPredicted RBP13.58□□□□□ -0.24
THBS3-202ENST00000428962 PAOXQ6QHF9 649 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 Q6ZNB5 142 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 METTL3Q86U44 580 aaKnown RBP13.58□□□□□ -0.24
THBS3-202ENST00000428962 GPSM1Q86YR5 675 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 ST13P4Q8IZP2 240 aaPredicted RBP13.58□□□□□ -0.24
THBS3-202ENST00000428962 SIDT2Q8NBJ9 832 aaKnown RBP13.58□□□□□ -0.24
THBS3-202ENST00000428962 DEFB118Q96PH6 123 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 HOPXQ9BPY8 73 aaPredicted RBP13.58□□□□□ -0.24
THBS3-202ENST00000428962 FBRSL1Q9HCM7 1045 aaKnown RBP13.58□□□□□ -0.24
THBS3-202ENST00000428962 SEMA4BQ9NPR2 832 aaPredicted RBP13.58□□□□□ -0.24
THBS3-202ENST00000428962 NUDT4Q9NZJ9 180 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 IL17CQ9P0M4 197 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 TMEM181Q9P2C4 612 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 POLG2Q9UHN1 485 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 OGDHLQ9ULD0 1010 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 PCDHB9Q9Y5E1 797 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 OR51B4Q9Y5P0 310 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 ANAPC1Q9H1A4 1944 aa13.58□□□□□ -0.24
THBS3-202ENST00000428962 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 NR5A2O00482 541 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 ANGPT2O15123 496 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 PGLSO95336 258 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 ESRRBO95718 433 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 TSPAN12O95859 305 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 OLFM2O95897 454 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 UROSP10746 265 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 HMGCLP35914 325 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 MRPL19P49406 292 aaKnown RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 ATN1P54259 1190 aaPredicted RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 CREMQ03060 361 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 DDX53Q86TM3 631 aaKnown RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 PHYKPLQ8IUZ5 450 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 FAM217AQ8IXS0 508 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 OR9I1Q8NGQ6 314 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 TSPEARQ8WU66 669 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 PBXIP1Q96AQ6 731 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 TOX2Q96NM4 488 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 TRAPPC9Q96Q05 1148 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 FAM192AQ9GZU8 254 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 COPS7BQ9H9Q2 264 aaPredicted RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 BPIFA1Q9NP55 256 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 SDR39U1Q9NRG7 319 aaPredicted RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.57□□□□□ -0.24
THBS3-202ENST00000428962 GID8Q9NWU2 228 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 SPG21Q9NZD8 308 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 CD274Q9NZQ7 290 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 PCTPQ9UKL6 214 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 IKZF3Q9UKT9 509 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 FNDC3AQ9Y2H6 1198 aaKnown RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 ZNF510Q9Y2H8 683 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 FCF1Q9Y324 198 aaKnown RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 COL4A6Q14031 1691 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 BPTFQ12830 3046 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 GFRA2O00451 464 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 PRMT5O14744 637 aaPredicted RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 OR1I1O60431 355 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 S100BP04271 92 aaPredicted RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 HGFP14210 728 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 RFC2P35250 354 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 MSX2P35548 267 aaPredicted RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 FOXA1P55317 472 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms