RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ZFYVE1Q9HBF4 777 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 B3GALT1Q9Y5Z6 326 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 HELZ2Q9BYK8 2649 aaKnown RBP16.91■□□□□ 0.3
TRIM39-209ENST00000428728 EFCAB7A8K855 629 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 A8MU76 341 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 J3QKU1 62 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 GRID2O43424 1007 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 ARSDP51689 593 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 CYP4F2P78329 520 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 PDK1Q15118 436 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 PLA2G4EQ3MJ16 856 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 TMEM71Q6P5X7 295 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 CRTC3Q6UUV7 619 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 VSTM4Q8IW00 320 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 ZSCAN1Q8NBB4 408 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 EID2BQ96D98 161 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 IMP4Q96G21 291 aaKnown RBP16.9■□□□□ 0.3
TRIM39-209ENST00000428728 CCDC42Q96M95 316 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 OLFM3Q96PB7 478 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 TRIB3Q96RU7 358 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 ARHGAP9Q9BRR9 750 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 HERPUD2Q9BSE4 406 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 B3GNT4Q9C0J1 378 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 OR2AG1Q9H205 316 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 CARD9Q9H257 536 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 OSGEPL1Q9H4B0 414 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 NHEJ1Q9H9Q4 299 aaPredicted RBP16.9■□□□□ 0.3
TRIM39-209ENST00000428728 SARS2Q9NP81 518 aaKnown RBP16.9■□□□□ 0.3
TRIM39-209ENST00000428728 OCIAD1Q9NX40 245 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 SLC39A1Q9NY26 324 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 ATXN10Q9UBB4 475 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 ZNF711Q9Y462 761 aa16.9■□□□□ 0.3
TRIM39-209ENST00000428728 RGSL1A5PLK6 1076 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 B8ZZF3 427 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.89■□□□□ 0.29
TRIM39-209ENST00000428728 PYCARD-AS1I3L0S3 204 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 NUAK1O60285 661 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 MTA2O94776 668 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 SLC25A14O95258 325 aaPredicted RBP16.89■□□□□ 0.29
TRIM39-209ENST00000428728 MT-CYBP00156 380 aaPredicted RBP16.89■□□□□ 0.29
TRIM39-209ENST00000428728 F3P13726 295 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 ZNF8P17098 575 aaPredicted RBP16.89■□□□□ 0.29
TRIM39-209ENST00000428728 ARHGAP25P42331 645 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 NOP2P46087 812 aaKnown RBP16.89■□□□□ 0.29
TRIM39-209ENST00000428728 ATP1A2P50993 1020 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 SQSTM1Q13501 440 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 LINC00303Q3SY05 128 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 VSIG1Q86XK7 387 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 PHYKPLQ8IUZ5 450 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 EXD3Q8N9H8 876 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 GPR26Q8NDV2 337 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 SPATA22Q8NHS9 363 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 NCSTNQ92542 709 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 GPR63Q9BZJ6 419 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 RMI1Q9H9A7 625 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 KLHL3Q9UH77 587 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 CFAP46Q8IYW2 2715 aa16.89■□□□□ 0.29
TRIM39-209ENST00000428728 PIEZO2Q9H5I5 2752 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 A6NCN8 305 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 SPOPO43791 374 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 SLC2A4P14672 509 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 ZFXP17010 805 aaPredicted RBP16.88■□□□□ 0.29
TRIM39-209ENST00000428728 DCDC1P59894 354 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 NFATC3Q12968 1075 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 LLGL1Q15334 1064 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 INSCQ1MX18 579 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 ANKS6Q68DC2 871 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 IYDQ6PHW0 289 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 MFSD7Q6UXD7 560 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 SLC9B2Q86UD5 537 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 RHOT1Q8IXI2 618 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 IL22RA1Q8N6P7 574 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 RNF214Q8ND24 703 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 HTR3CQ8WXA8 447 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 ANP32EQ9BTT0 268 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 ZSCAN5AQ9BUG6 496 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 DDA1Q9BW61 102 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 SLC25A51Q9H1U9 297 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 PRDM8Q9NQV8 689 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 UBP1Q9NZI7 540 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 PCDHGA3Q9Y5H0 932 aa16.88■□□□□ 0.29
TRIM39-209ENST00000428728 A0A0A6YYK5 440 aaPredicted RBP16.87■□□□□ 0.29
TRIM39-209ENST00000428728 F5H423 210 aaPredicted RBP16.87■□□□□ 0.29
TRIM39-209ENST00000428728 SLC28A2O43868 658 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 MTX2O75431 263 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 PMPCBO75439 489 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 ITGB2P05107 769 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 FAM87AP0C7U9 286 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 UGT1A3P35503 534 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 CDK18Q07002 472 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 LRRC38Q5VT99 294 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 PRICKLE2Q7Z3G6 844 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 NKD1Q969G9 470 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 GLYATL1Q969I3 302 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 SH3KBP1Q96B97 665 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 TBC1D10AQ9BXI6 508 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 TSPY26PQ9H489 355 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 GLOD4Q9HC38 313 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 MAGEE1Q9HCI5 957 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 KLC4Q9NSK0 619 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms