RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 TFAP2DQ7Z6R9 452 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 PIM3Q86V86 326 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 MICU2Q8IYU8 434 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 HMGCLL1Q8TB92 370 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 METTL6Q8TCB7 284 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 DNAJB3Q8WWF6 145 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 TMEM125Q96AQ2 219 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 MRGPRX2Q96LB1 330 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 SMOQ99835 787 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 RBM4BQ9BQ04 359 aaKnown RBP10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 RBM4Q9BWF3 364 aaKnown RBP10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 ABCC13Q9NSE7 274 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 CATSPERZQ9NTU4 200 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 TRMT6Q9UJA5 497 aaKnown RBP10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 VPS9D1Q9Y2B5 631 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 FAM234BA2RU67 622 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 DYNC1LI2O43237 492 aaPredicted RBP10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 NDUFS2O75306 463 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 VPS26AO75436 327 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 USP2O75604 605 aaPredicted RBP10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 THP07101 528 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 ENO2P09104 434 aaPredicted RBP10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 TRPC1P48995 793 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 PM20D1Q6GTS8 502 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 ABHD11Q8NFV4 315 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 RMDN1Q96DB5 314 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 UBXN10Q96LJ8 280 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 DOK1Q99704 481 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 CXCL16Q9H2A7 254 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 NANOGQ9H9S0 305 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 GPN2Q9H9Y4 310 aaPredicted RBP10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 UXTQ9UBK9 157 aaPredicted RBP10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 PTGDR2Q9Y5Y4 395 aa10.7□□□□□ -0.7
ATP2C1-204ENST00000428331 HTR3EA5X5Y0 456 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 BTN3A1O00481 513 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 NPPAP01160 153 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 UROSP10746 265 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 GSTM2P28161 218 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 IGFN1Q86VF2 1251 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 KCNA7Q96RP8 456 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 MCMBPQ9BTE3 642 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 USE1Q9NZ43 259 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 MPP6Q9NZW5 540 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 SOCS7O14512 581 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 DNAJB5O75953 348 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 GSNP06396 782 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 CD247P20963 164 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 MATN1P21941 496 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 S100A1P23297 94 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 ERVK-8P63133 956 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 VAC14Q08AM6 782 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 INAQ16352 499 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 TXNDC11Q6PKC3 985 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 GPRIN3Q6ZVF9 776 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 SVOPQ8N4V2 548 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 NKAPQ8N5F7 415 aaKnown RBP10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 OR2T12Q8NG77 320 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 TMEM209Q96SK2 561 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 LHPPQ9H008 270 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 RNF39Q9H2S5 420 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 TNFRSF12AQ9NP84 129 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 DNAJB9Q9UBS3 223 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 SEC24AO95486 1093 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 IL7RP16871 459 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 ARNTP27540 789 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 MAPRE1Q15691 268 aaKnown RBP10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 C6orf141Q5SZD1 244 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 DENND5AQ6IQ26 1287 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 TMEM53Q6P2H8 277 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 FKBP9P1Q75LS8 142 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 CTU1Q7Z7A3 348 aaKnown RBP10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 TMEM199Q8N511 208 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 CDYL2Q8N8U2 506 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 ZIM2Q9NZV7 527 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 MTRRQ9UBK8 725 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 EIF3LQ9Y262 564 aaKnown RBP10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 IPPQ9Y573 584 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 PTPRFP10586 1907 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 TTC24A2A3L6 582 aaPredicted RBP10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 MAFKO60675 156 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 FYNP06241 537 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 ODC1P11926 461 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 LSM3P62310 102 aaKnown RBP10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 ECT2LQ008S8 904 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 PRR23BQ6ZRT6 265 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 SPATA2LQ8IUW3 424 aaPredicted RBP10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 KIAA2013Q8IYS2 634 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 SLC30A3Q99726 388 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 MUC3BQ9H195 1237 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 WDR81Q562E7 1941 aa10.69□□□□□ -0.7
ATP2C1-204ENST00000428331 TMX2-CTNND1H3BSU7 103 aa10.68□□□□□ -0.7
ATP2C1-204ENST00000428331 UBFD1O14562 309 aaKnown RBP10.68□□□□□ -0.7
ATP2C1-204ENST00000428331 TOR1BO14657 336 aa10.68□□□□□ -0.7
ATP2C1-204ENST00000428331 SLC22A1O15245 554 aa10.68□□□□□ -0.7
ATP2C1-204ENST00000428331 APOA1P02647 267 aa10.68□□□□□ -0.7
ATP2C1-204ENST00000428331 FMO4P31512 558 aa10.68□□□□□ -0.7
ATP2C1-204ENST00000428331 HOXD12P35452 270 aa10.68□□□□□ -0.7
ATP2C1-204ENST00000428331 UFM1P61960 85 aa10.68□□□□□ -0.7
ATP2C1-204ENST00000428331 CACNB2Q08289 660 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms