RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 IPO13O94829 963 aaKnown RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 RBBP4Q09028 425 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 NOMO2Q5JPE7 1267 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 TWIST2Q8WVJ9 160 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 HSFY1Q96LI6 401 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 TUBGCP5Q96RT8 1024 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 NODALQ96S42 347 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 SAMD4AQ9UPU9 718 aaKnown RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 POMPQ9Y244 141 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 AIREO43918 545 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 CHRM5P08912 532 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-204ENST00000428026 ACADMP11310 421 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 IDH3AP50213 366 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 CRYBB1P53674 252 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-204ENST00000428026 PIK3R6Q5UE93 754 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 TMEM214Q6NUQ4 689 aaKnown RBP14.41□□□□□ -0.1
PTPRU-204ENST00000428026 ZNF613Q6PF04 617 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 PAOXQ6QHF9 649 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 LDB1Q86U70 411 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-204ENST00000428026 PIGKQ92643 395 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 FTHL17Q9BXU8 183 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 CDT1Q9H211 546 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 CHRAC1Q9NRG0 131 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 NT5C1B-RDH14C9J2C7 533 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 RTN3O95197 1032 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-204ENST00000428026 ATP6V0D1P61421 351 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 MYBPC1Q00872 1141 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 THOC7Q6I9Y2 204 aaKnown RBP14.41□□□□□ -0.1
PTPRU-204ENST00000428026 TRIM40Q6P9F5 258 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 OTOP3Q7RTS5 596 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 CLIP4Q8N3C7 705 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 ANKRD52Q8NB46 1076 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 TRPV1Q8NER1 839 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 TAS2R1Q9NYW7 299 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 RBPJLQ9UBG7 517 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 KLRG2A4D1S0 409 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-204ENST00000428026 XYLBO75191 536 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 TGFBR2P37173 567 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 SUZ12Q15022 739 aaKnown RBP14.41□□□□□ -0.1
PTPRU-204ENST00000428026 SDHAF4Q5VUM1 108 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 ZYG11BQ9C0D3 744 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 MARCH7Q9H992 704 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 EXD2Q9NVH0 621 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 DHRS7Q9Y394 339 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 TBX1O43435 398 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 RPN2P04844 631 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 HIST1H2ABP04908 130 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 FESP07332 822 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 IFI30P13284 250 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 MC4RP32245 332 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 FOXN2P32314 431 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 PPP2R2BQ00005 443 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 INSCQ1MX18 579 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 SULT1C3Q6IMI6 304 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 FAM151BQ6UXP7 276 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 HIST3H2AQ7L7L0 130 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 LRRC57Q8N9N7 239 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 HIST1H2ACQ93077 130 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 DHX33Q9H6R0 707 aaKnown RBP14.41□□□□□ -0.1
PTPRU-204ENST00000428026 TNFSF13BQ9Y275 285 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 ZNF879B4DU55 563 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 AP3D1O14617 1153 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 DUSP11O75319 330 aaKnown RBP14.41□□□□□ -0.1
PTPRU-204ENST00000428026 HNMTP50135 292 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 BCAP31P51572 246 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 GBE1Q04446 702 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 GPR158Q5T848 1215 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 HECTD2Q5U5R9 776 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 RPTNQ6XPR3 784 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 OTOP2Q7RTS6 562 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 CYP4X1Q8N118 509 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 SPACA7Q96KW9 195 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 APOLD1Q96LR9 279 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 FCRL4Q96PJ5 515 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 SPATA5L1Q9BVQ7 753 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 MED28Q9H204 178 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 TMLHEQ9NVH6 421 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 SNX7Q9UNH6 387 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 PCDHGA3Q9Y5H0 932 aa14.41□□□□□ -0.1
PTPRU-204ENST00000428026 STX16-NPEPL1H3BU86 382 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 STX16O14662 325 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 TRIM3O75382 744 aaPredicted RBP14.4□□□□□ -0.1
PTPRU-204ENST00000428026 COL6A1P12109 1028 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 YAP1P46937 504 aaKnown RBP14.4□□□□□ -0.1
PTPRU-204ENST00000428026 TSC22D1Q15714 1073 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 ATL1Q8WXF7 558 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 CENPNQ96H22 339 aaPredicted RBP14.4□□□□□ -0.1
PTPRU-204ENST00000428026 CEP295NLQ96MC4 621 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 HBEGFQ99075 208 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 ACO2Q99798 780 aaKnown RBP14.4□□□□□ -0.1
PTPRU-204ENST00000428026 LRRC14BA6NHZ5 514 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 TREHO43280 583 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 MARSP56192 900 aaKnown RBP14.4□□□□□ -0.1
PTPRU-204ENST00000428026 MPP1Q00013 466 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 FAM43BQ6ZT52 329 aaPredicted RBP14.4□□□□□ -0.1
PTPRU-204ENST00000428026 RASAL3Q86YV0 1011 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 C7orf61Q8IZ16 206 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 DAW1Q8N136 415 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 PDPRQ8NCN5 879 aa14.4□□□□□ -0.1
PTPRU-204ENST00000428026 HM13Q8TCT9 377 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms