RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 HLA-DPA1P20036 260 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 VARSP26640 1264 aaKnown RBP9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PSMB4P28070 264 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PDX1P52945 283 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CCL7P80098 99 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CTBSQ01459 385 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 MPP3Q13368 585 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 HLTFQ14527 1009 aaKnown RBP eCLIP9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PYCR3Q53H96 274 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 C3orf38Q5JPI3 329 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SIRPB2Q5JXA9 342 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZNF648Q5T619 568 aaPredicted RBP9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ITPRIPL1Q6GPH6 555 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TMC3Q7Z5M5 1100 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NLRP8Q86W28 1048 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RAVER1Q8IY67 606 aaKnown RBP9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CACTIN-AS1Q8N1I8 211 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CCDC110Q8TBZ0 833 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 BLOC1S5Q8TDH9 187 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GPBAR1Q8TDU6 330 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZDHHC1Q8WTX9 485 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PATE1Q8WXA2 126 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ATXN7L3BQ96GX2 97 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SPATA13Q96N96 652 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 BPIFA1Q9NP55 256 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RAD18Q9NS91 495 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GMPR2Q9P2T1 348 aaKnown RBP9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZNHIT2Q9UHR6 403 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CNOT6Q9ULM6 557 aaKnown RBP9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PRKAB1Q9Y478 270 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PCYT1BQ9Y5K3 369 aaPredicted RBP9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ST14Q9Y5Y6 855 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RNF215Q9Y6U7 377 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 FREM2Q5SZK8 3169 aa9.14□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ARID1BQ8NFD5 2236 aaPredicted RBP9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LOC285095A0A1B0GVY8 99 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 A0A1W2PQM1 296 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PMS2P1A4D2B8 440 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NTN3O00634 580 aaPredicted RBP9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ARHGAP6O43182 974 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 DNAJC6O75061 913 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TCEA3O75764 348 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ANXA9O76027 345 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ECEL1O95672 775 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 EPOP01588 193 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 FGF1P05230 155 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ACP5P13686 325 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GLB1P16278 677 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GEMP55040 296 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 OLIG2Q13516 323 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LRP8Q14114 963 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PRPSAP1Q14558 356 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RTP5Q14D33 572 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SLC1A5Q15758 541 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 MAP9Q49MG5 647 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 OGFOD3Q6PK18 319 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CRTC3Q6UUV7 619 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GLT6D1Q7Z4J2 308 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SPRED1Q7Z699 444 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 B3GNT8Q7Z7M8 397 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PHYKPLQ8IUZ5 450 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TTC30BQ8N4P2 665 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TRAM1L1Q8N609 369 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CCDC112Q8NEF3 446 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 OR6C4Q8NGE1 309 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 WDR48Q8TAF3 677 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GLYATL1Q969I3 302 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SCARF2Q96GP6 870 aaPredicted RBP9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GFM1Q96RP9 751 aaKnown RBP9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SRPK1Q96SB4 655 aaKnown RBP9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 APOL2Q9BQE5 337 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GORASP1Q9BQQ3 440 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZSCAN5AQ9BUG6 496 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 FOXP3Q9BZS1 431 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 FAM117AQ9C073 453 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZMYND15Q9H091 742 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LRRN3Q9H3W5 708 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 VPS18Q9P253 973 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LRIT1Q9P2V4 623 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NFKBIL1Q9UBC1 381 aaPredicted RBP9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ATXN7L1Q9ULK2 861 aaPredicted RBP9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GUCA1BQ9UMX6 200 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SATB2Q9UPW6 733 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 KCNK6Q9Y257 313 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 R3HDM2Q9Y2K5 976 aaKnown RBP9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ENTPD2Q9Y5L3 495 aa9.13□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ASPMQ8IZT6 3477 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TCRBV7S2A1N4TA0A589 114 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RHPN2P1A8MT19 583 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 AGRPO00253 132 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GPR39O43194 453 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 BUD23O43709 281 aaKnown RBP9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TLX3O43711 291 aaPredicted RBP9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 KRT86O43790 486 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NUDT21O43809 227 aaKnown RBP9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 MTX2O75431 263 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SLC25A14O95258 325 aaPredicted RBP9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 AGTP01019 485 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZNF8P17098 575 aaPredicted RBP9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 KLF1Q13351 362 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms