RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-215	ENST00000427487	ZNF514	Q96K75	400 aa	Predicted RBP	11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	ZC3H10	Q96K80	434 aa	Known RBP	11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	PAFAH2	Q99487	392 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	COPS8	Q99627	209 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	ACBD3	Q9H3P7	528 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	RHOJ	Q9H4E5	214 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	RMI1	Q9H9A7	625 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	CD93	Q9NPY3	652 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	C11orf16	Q9NQ32	467 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	SMYD2	Q9NRG4	433 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	IARS2	Q9NSE4	1012 aa	Known RBP	11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	EURL	Q9NYK6	297 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	KLHL42	Q9P2K6	505 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	MBD1	Q9UIS9	605 aa	Predicted RBP	11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	PLAA	Q9Y263	795 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	PCDHGA2	Q9Y5H1	932 aa		11.96	□□□□□ -0.49
HDLBP-215	ENST00000427487	KMT2E	Q8IZD2	1858 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	CCDC78	A2IDD5	438 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	FAM47DP	A6NHR8	397 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	GOLGA8CP	A6NN73	597 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	FADS2P1	A8MWK0	482 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	CXorf49	A8MYA2	514 aa	Predicted RBP	11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	TNFRSF10C	O14798	259 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	RASGRF2	O14827	1237 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	GALR2	O43603	387 aa	Predicted RBP	11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	MAGEC1	O60732	1142 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	NDUFS3	O75489	264 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	KRT37	O76014	449 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	KRT38	O76015	456 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	AHSG	P02765	367 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	MYCLP1	P12525	358 aa	Predicted RBP	11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	KEL	P23276	732 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	HOXD12	P35452	270 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	RABIF	P47224	123 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	LIMK2	P53671	638 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	KIAA1024L	P59773	190 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	PFN3	P60673	137 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	CDK3	Q00526	305 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	RPL6	Q02878	288 aa	Known RBP	11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	CSTF1	Q05048	431 aa	Known RBP	11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	IFFO1	Q0D2I5	559 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	IRF4	Q15306	451 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	DBN1	Q16643	649 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	WDR45B	Q5MNZ6	344 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	GPRC6A	Q5T6X5	926 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	PSAPL1	Q6NUJ1	521 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	MACC1	Q6ZN28	852 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	CAPN12	Q6ZSI9	719 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	LPCAT2	Q7L5N7	544 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	ZC3HC1	Q86WB0	502 aa	Known RBP	11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	CTAGE3P	Q8IX95	158 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	UNC5B	Q8IZJ1	945 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	PPM1N	Q8N819	430 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	RLN3	Q8WXF3	142 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	LPGAT1	Q92604	370 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	ISL2	Q96A47	359 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	HIC2	Q96JB3	615 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	AGAP2	Q99490	1192 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	RBBP8	Q99708	897 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	ORAI3	Q9BRQ5	295 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	WDR26	Q9H7D7	661 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	TRIM39	Q9HCM9	518 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	GPR27	Q9NS67	375 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	LGALS13	Q9UHV8	139 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	CNOT6	Q9ULM6	557 aa	Known RBP	11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	GPR34	Q9UPC5	381 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	COQ6	Q9Y2Z9	468 aa		11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.95	□□□□□ -0.5
HDLBP-215	ENST00000427487	PLXNB3	Q9ULL4	1909 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	IQANK1	A0A1B0GTG1	560 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	OR51F1	A6NGY5	319 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	CCL22	O00626	93 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	MAP3K13	O43283	966 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	KCNJ13	O60928	360 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	LILRB5	O75023	590 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	SLC25A14	O95258	325 aa	Predicted RBP	11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	SHBG	P04278	402 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	GCA	P28676	217 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	IGFALS	P35858	605 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	PXN	P49023	591 aa	Predicted RBP	11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	FNTB	P49356	437 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	RACK1	P63244	317 aa	Known RBP	11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	CTBP1	Q13363	440 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	INPP5A	Q14642	412 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	TMEM31	Q5JXX7	168 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	UBAP2	Q5T6F2	1119 aa	Known RBP	11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	PMS2CL	Q68D20	193 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	TIFAB	Q6ZNK6	161 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	TAS2R42	Q7RTR8	314 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	STRA8	Q7Z7C7	330 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	DENND6A	Q8IWF6	608 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	MFSD2A	Q8NA29	543 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	DCAKD	Q8WVC6	231 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	PGM2	Q96G03	612 aa		11.94	□□□□□ -0.5
HDLBP-215	ENST00000427487	SCARF2	Q96GP6	870 aa	Predicted RBP	11.94	□□□□□ -0.5

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