RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PM20D2Q8IYS1 436 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 OR2L3Q8NG85 312 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SGCDQ92629 289 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 HTRA1Q92743 480 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 NSMCE3Q96MG7 304 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 GPATCH1Q9BRR8 931 aaKnown RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 PORCNQ9H237 461 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 LRTM1Q9HBL6 345 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 PTPRHQ9HD43 1115 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 CLPXO76031 633 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 MTHFD1P11586 935 aaKnown RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SLC6A4P31645 630 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 PIK3CBP42338 1070 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 TOB1P50616 345 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SLC22A4Q9H015 551 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 AFDNP55196 1824 aaKnown RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 ENTPD5O75356 428 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SRPRAP08240 638 aaKnown RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 DPY19L1Q2PZI1 675 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 PARP15Q460N3 678 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 C4orf46Q504U0 113 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 MARCH7Q9H992 704 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 ABI3Q9P2A4 366 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 PCDH10Q9P2E7 1040 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 FFAR3O14843 346 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 GPR42O15529 346 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 CYP3A4P08684 503 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 TACSTD2P09758 323 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 CD247P20963 164 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 PPM1AP35813 382 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 GNALP38405 381 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 C9orf43Q8TAL5 461 aaPredicted RBP14.36□□□□□ -0.11
PTPN13-203ENST00000427191 OR8D1Q8WZ84 308 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 HIST1H2AAQ96QV6 131 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 RHBGQ9H310 441 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 POLR3HQ9Y535 204 aaPredicted RBP14.36□□□□□ -0.11
PTPN13-203ENST00000427191 TRIM17Q9Y577 477 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 ZNF806P0C7X5 589 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 PET100P0DJ07 73 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 ATXN1P54253 815 aaKnown RBP14.36□□□□□ -0.11
PTPN13-203ENST00000427191 CCNYL2Q5T2Q4 361 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 XKRXQ6PP77 449 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 SLC9A9Q8IVB4 645 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 RPL26P61254 145 aaKnown RBP14.36□□□□□ -0.11
PTPN13-203ENST00000427191 ZSWIM2Q8NEG5 633 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 NODALQ96S42 347 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 MAP10Q9P2G4 905 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 ABCG2Q9UNQ0 655 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 CXCR3P49682 368 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 PFKPQ01813 784 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 PRKD1Q15139 912 aaPredicted RBP14.36□□□□□ -0.11
PTPN13-203ENST00000427191 PLEKHG6Q3KR16 790 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 CES3Q6UWW8 571 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 ANKRD52Q8NB46 1076 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 NAT14Q8WUY8 206 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 CEP41Q9BYV8 373 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 IKZF2Q9UKS7 526 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 DERAQ9Y315 318 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 PLLPQ9Y342 182 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 C5orf60A6NFR6 353 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 CLDN4O14493 209 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 ELFN1P0C7U0 828 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 CYP4B1P13584 511 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 SSR2P43308 183 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 SLC9B1Q4ZJI4 515 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 CWF19L1Q69YN2 538 aaKnown RBP14.36□□□□□ -0.11
PTPN13-203ENST00000427191 CUZD1Q86UP6 607 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 MND1Q9BWT6 205 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 FBXO6Q9NRD1 293 aaPredicted RBP14.36□□□□□ -0.11
PTPN13-203ENST00000427191 NTSR2O95665 410 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 SYVN1Q86TM6 617 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 GPR156Q8NFN8 814 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 PSKH2Q96QS6 385 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 PCDHGB6Q9Y5F9 930 aa14.36□□□□□ -0.11
PTPN13-203ENST00000427191 OR2AT4A6NND4 320 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 ACSL1P33121 698 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 MAZP56270 477 aaKnown RBP14.35□□□□□ -0.11
PTPN13-203ENST00000427191 ZNF613Q6PF04 617 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 LINC00471Q8N535 108 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 SGK2Q9HBY8 427 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 TNFRSF11BO00300 401 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 SCN2BO60939 215 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 SP100P23497 879 aaPredicted RBP14.35□□□□□ -0.11
PTPN13-203ENST00000427191 KCNJ2P63252 427 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 MPP2Q14168 576 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 SAPCD2Q86UD0 394 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 CHMP1AQ9HD42 196 aaPredicted RBP14.35□□□□□ -0.11
PTPN13-203ENST00000427191 MIOSQ9NXC5 875 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 VWA7Q9Y334 891 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 ROBO3Q96MS0 1386 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 CLDN9O95484 217 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 C22orf31O95567 290 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 MATKP42679 507 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 RGS8P57771 180 aaPredicted RBP14.35□□□□□ -0.11
PTPN13-203ENST00000427191 HERC3Q15034 1050 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 SPATS1Q496A3 300 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 GXYLT1Q4G148 440 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms