RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 HID1Q8IV36 788 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 MMAAQ8IVH4 418 aaKnown RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 PRICKLE1Q96MT3 831 aaPredicted RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 ATP6AP2A0A1C7CYW4 349 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 RHPN2P1A8MT19 583 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 ATP6AP2O75787 350 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 METTL18O95568 372 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 ALPPL2P10696 532 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 RALGPS1Q5JS13 557 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 DEPDC1Q5TB30 811 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 CPNE8Q86YQ8 564 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 UTP15Q8TED0 518 aaKnown RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 ABTB1Q969K4 478 aaPredicted RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 ITCHQ96J02 903 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 SFXN1Q9H9B4 322 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 HEBP2Q9Y5Z4 205 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 ACVRL1P37023 503 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 PKNOX1P55347 436 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 CAPRIN2Q6IMN6 1127 aaKnown RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 IQCKQ8N0W5 287 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 LCN9Q8WX39 176 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 ZNF490Q9ULM2 529 aaPredicted RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 ARL5AQ9Y689 179 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.78□□□□□ -0.2
RPL28-202ENST00000426763 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.78□□□□□ -0.2
RPL28-202ENST00000426763 SNAP91O60641 907 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 SERPINA6P08185 405 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 HOXA11P31270 313 aaPredicted RBP13.78□□□□□ -0.2
RPL28-202ENST00000426763 PAFAH1B3Q15102 231 aaKnown RBP13.78□□□□□ -0.2
RPL28-202ENST00000426763 LRRC73Q5JTD7 316 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 FSTL4Q6MZW2 842 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 CASP12Q6UXS9 341 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 PANX1Q96RD7 426 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 RPS6KA6Q9UK32 745 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 POLR3HQ9Y535 204 aaPredicted RBP13.78□□□□□ -0.2
RPL28-202ENST00000426763 BACE2Q9Y5Z0 518 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 CLDN9O95484 217 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 CHRNA4P43681 627 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 ZYG11AQ6WRX3 759 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 C2orf73Q8N5S3 287 aaPredicted RBP13.78□□□□□ -0.2
RPL28-202ENST00000426763 OR6Y1Q8NGX8 325 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 DLG3Q92796 817 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 TMEM248Q9NWD8 314 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 ANAPC2Q9UJX6 822 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 MBLAC1A4D2B0 266 aaPredicted RBP13.78□□□□□ -0.2
RPL28-202ENST00000426763 KDELR3O43731 214 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 ATP13A5Q4VNC0 1218 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 SULT1C3Q6IMI6 304 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 SPATA19Q7Z5L4 167 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 ZC3H7AQ8IWR0 971 aaKnown RBP13.78□□□□□ -0.2
RPL28-202ENST00000426763 DCAF4L2Q8NA75 395 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 HHIPL1Q96JK4 782 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 TMEM209Q96SK2 561 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 HERC2P3Q9BVR0 1158 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 OSBPL6Q9BZF3 934 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 PNPOQ9NVS9 261 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 MAFFQ9ULX9 164 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 CCDC189A1A4V9 331 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 NR2F1P10589 423 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 UMPSP11172 480 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 TCF4P15884 667 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 OGDHQ02218 1023 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 LRRC32Q14392 662 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 GSTA3Q16772 222 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 GPAT3Q53EU6 434 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 ZNF776Q68DI1 518 aaPredicted RBP13.78□□□□□ -0.2
RPL28-202ENST00000426763 TXNRD3NBQ6F5E7 133 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 ANKLE1Q8NAG6 615 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 KLK6Q92876 244 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 CEP44Q9C0F1 390 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 ATG10Q9H0Y0 220 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 WDR26Q9H7D7 661 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 ZNF446Q9NWS9 450 aa13.78□□□□□ -0.2
RPL28-202ENST00000426763 J3KR12 359 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 RHOP08100 348 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 PPIBP23284 216 aaKnown RBP13.77□□□□□ -0.2
RPL28-202ENST00000426763 GNPDA1P46926 289 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 CYP4F2P78329 520 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 KPNB1Q14974 876 aaKnown RBP13.77□□□□□ -0.2
RPL28-202ENST00000426763 MYLK3Q32MK0 819 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 OTUD3Q5T2D3 398 aaPredicted RBP13.77□□□□□ -0.2
RPL28-202ENST00000426763 RPAINQ86UA6 219 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 RAD51AP1Q96B01 352 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 REEP1Q9H902 201 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 SPAG4Q9NPE6 437 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 BATF3Q9NR55 127 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 SAGE1Q9NXZ1 904 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 DUSP12Q9UNI6 340 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 UBXN8O00124 270 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 TGDSO95455 350 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 APOA1P02647 267 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 CDH3P22223 829 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 PSME3P61289 254 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 MRPS35P82673 323 aaKnown RBP13.77□□□□□ -0.2
RPL28-202ENST00000426763 ALFQ53S48 1182 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 PPM1JQ5JR12 505 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 CST9Q5W186 159 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 GCNT7Q6ZNI0 430 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 Q6ZVU0 165 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 SIDT2Q8NBJ9 832 aaKnown RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms