RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 WHRNQ9P202 907 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 MOSPD1Q9UJG1 213 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 SOX13Q9UN79 622 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 PCDHGB2Q9Y5G2 931 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 GVINP1Q7Z2Y8 2422 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 PRSS38A1L453 326 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 PCDHGA12O60330 932 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 TNFP01375 233 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 NMBRP28336 390 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 SLC7A5Q01650 507 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 SLC14A1Q13336 389 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 ARMC3Q5W041 872 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 SNX20Q7Z614 316 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 GATAD2AQ86YP4 633 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 SCARF2Q96GP6 870 aaPredicted RBP24.25■■□□□ 1.47
VEGFA-209ENST00000425836 PWWP2AQ96N64 755 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 SLC13A1Q9BZW2 595 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 FAM96AQ9H5X1 160 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 L2HGDHQ9H9P8 463 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 SMOXQ9NWM0 555 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 VPS18Q9P253 973 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 APOBEC3BQ9UH17 382 aaKnown RBP24.25■■□□□ 1.47
VEGFA-209ENST00000425836 SLC30A1Q9Y6M5 507 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 ADAMTS9Q9P2N4 1935 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 KNL1Q8NG31 2342 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 CCDC162PA2VCL2 907 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 AGAP14A8MT82 685 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 H3BM21 787 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 NDC80O14777 642 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 SCAMP1O15126 338 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 MTX2O75431 263 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 ASMTLO95671 621 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 IVLP07476 585 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 CD59P13987 128 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 DGKAP23743 735 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 BLKP51451 505 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 KHDC1Q4VXA5 237 aaKnown RBP24.25■■□□□ 1.47
VEGFA-209ENST00000425836 DNTTIP2Q5QJE6 756 aaKnown RBP24.25■■□□□ 1.47
VEGFA-209ENST00000425836 CASC4Q6P4E1 433 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 CES3Q6UWW8 571 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 DBX2Q6ZNG2 339 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 KANSL1Q7Z3B3 1105 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 ADGRG6Q86SQ4 1221 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 MFSD3Q96ES6 412 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 UCKL1Q9NWZ5 548 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 GRHL1Q9NZI5 618 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 SAMD15Q9P1V8 674 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 ATXN10Q9UBB4 475 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 SUFUQ9UMX1 484 aa24.25■■□□□ 1.47
VEGFA-209ENST00000425836 PTPRZ1P23471 2315 aaPredicted RBP24.24■■□□□ 1.47
VEGFA-209ENST00000425836 ZNF292O60281 2723 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 MAGEB16A2A368 324 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 OR51F1A6NGY5 319 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 ITGALP20701 1170 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 HOXD11P31277 338 aaPredicted RBP24.24■■□□□ 1.47
VEGFA-209ENST00000425836 TRADDQ15628 312 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 MSS51Q4VC12 460 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 ZRANB3Q5FWF4 1079 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 GPRC6AQ5T6X5 926 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 MARK2Q7KZI7 788 aaKnown RBP24.24■■□□□ 1.47
VEGFA-209ENST00000425836 SLC25A45Q8N413 288 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 DDHD1Q8NEL9 900 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 GDAP1Q8TB36 358 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 TRIM56Q9BRZ2 755 aaKnown RBP24.24■■□□□ 1.47
VEGFA-209ENST00000425836 OR2AG1Q9H205 316 aa24.24■■□□□ 1.47
VEGFA-209ENST00000425836 CARS2Q9HA77 564 aaKnown RBP24.24■■□□□ 1.47
VEGFA-209ENST00000425836 SCN8AQ9UQD0 1980 aa24.23■■□□□ 1.47
VEGFA-209ENST00000425836 PRSS56P0CW18 603 aa24.23■■□□□ 1.47
VEGFA-209ENST00000425836 CDKN1CP49918 316 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-209ENST00000425836 DRG2P55039 364 aaKnown RBP24.23■■□□□ 1.47
VEGFA-209ENST00000425836 CALCOCO2Q13137 446 aa24.23■■□□□ 1.47
VEGFA-209ENST00000425836 SUZ12Q15022 739 aaKnown RBP24.23■■□□□ 1.47
VEGFA-209ENST00000425836 GPR33Q49SQ1 333 aa24.23■■□□□ 1.47
VEGFA-209ENST00000425836 PRRT3Q5FWE3 981 aa24.23■■□□□ 1.47
VEGFA-209ENST00000425836 LDLRAP1Q5SW96 308 aa24.23■■□□□ 1.47
VEGFA-209ENST00000425836 ZNF548Q8NEK5 533 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-209ENST00000425836 LRRC61Q9BV99 259 aa24.23■■□□□ 1.47
VEGFA-209ENST00000425836 CRLS1Q9UJA2 301 aa24.23■■□□□ 1.47
VEGFA-209ENST00000425836 DNAH14Q0VDD8 3507 aa24.23■■□□□ 1.47
VEGFA-209ENST00000425836 TRBV5-4A0A0C4DH59 114 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 FAM237BA0A1B0GVD1 139 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 DNAJC6O75061 913 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 BANF1O75531 89 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 GOT2P00505 430 aaKnown RBP24.22■■□□□ 1.47
VEGFA-209ENST00000425836 ZNF8P17098 575 aaPredicted RBP24.22■■□□□ 1.47
VEGFA-209ENST00000425836 GNPDA1P46926 289 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 CACNG1Q06432 222 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 DHX9Q08211 1270 aaKnown RBP24.22■■□□□ 1.47
VEGFA-209ENST00000425836 C1orf61Q13536 156 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 DNAJC21Q5F1R6 531 aaKnown RBP24.22■■□□□ 1.47
VEGFA-209ENST00000425836 PDIK1LQ8N165 341 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 OR6P1Q8NGX9 317 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 LMX1AQ8TE12 382 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 ULK4Q96C45 1275 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 SPASTQ9UBP0 616 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 PCYT1BQ9Y5K3 369 aaPredicted RBP24.22■■□□□ 1.47
VEGFA-209ENST00000425836 MAD1L1Q9Y6D9 718 aa24.22■■□□□ 1.47
VEGFA-209ENST00000425836 VEGFDO43915 354 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 NUAK1O60285 661 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 FOXN2P32314 431 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms