RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 TRAPPC11Q7Z392 1133 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 TMPRSS12Q86WS5 348 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 XYLT1Q86Y38 959 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 MARCH9Q86YJ5 346 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 WDR49Q8IV35 697 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 GPD1LQ8N335 351 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 MPP5Q8N3R9 675 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 ZNF276Q8N554 614 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 ZCCHC9Q8N567 271 aaKnown RBP4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 FITM2Q8N6M3 262 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 PDPRQ8NCN5 879 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 B3GALNT2Q8NCR0 500 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 FAM46DQ8NEK8 389 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 ZMIZ2Q8NF64 920 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 OR52N2Q8NGI0 321 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 SCAMP5Q8TAC9 235 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 SETD7Q8WTS6 366 aaKnown RBP4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 STYXQ8WUJ0 223 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 TFAP2CQ92754 450 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 FBXO32Q969P5 355 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 TRIM63Q969Q1 353 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 LRRC46Q96FV0 321 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 ANKRD36BP1Q96IX9 119 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 UBXN10Q96LJ8 280 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 KCNK16Q96T55 309 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 DPYSL5Q9BPU6 564 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 SORBS1Q9BX66 1292 aaKnown RBP4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 CPEB1Q9BZB8 566 aaKnown RBP4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 DPEP3Q9H4B8 488 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 ZHX3Q9H4I2 956 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 MRPL44Q9H9J2 332 aaKnown RBP4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 CSNK1G1Q9HCP0 422 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 DNAJC17Q9NVM6 304 aaKnown RBP4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 RRN3Q9NYV6 651 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 LRFN1Q9P244 771 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 THAP10Q9P2Z0 257 aaPredicted RBP4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 CHORDC1Q9UHD1 332 aaPredicted RBP4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 CLCA2Q9UQC9 943 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 BTBD3Q9Y2F9 522 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 SH3BP1Q9Y3L3 701 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 PCDHGA1Q9Y5H4 931 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 RAD54BQ9Y620 910 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 SLCO1B1Q9Y6L6 691 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 STON1Q9Y6Q2 735 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 MYOFQ9NZM1 2061 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 COL6A6A6NMZ7 2263 aa4.8□□□□□ -1.64
CDC42EP3-202ENST00000422687 LOC102723971A0A1B0GUV8 181 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 A0A1B0GVT2 93 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 ZNF233A6NK53 670 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 EIF4E1BA6NMX2 242 aaKnown RBP4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 CYSRT1A8MQ03 144 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 MEI4A8MW99 385 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 NEDD8-MDP1E9PL57 170 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 MYO1CO00159 1063 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 CLDN5O00501 218 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 TLX3O43711 291 aaPredicted RBP4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 NOBOXO60393 691 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 GCNT3O95395 438 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 TBX18O95935 607 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 TNNC2P02585 160 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 PRB1P04280 392 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 CR2P20023 1033 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 GCSHP23434 173 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 HOXD13P35453 343 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 EIF2S3P41091 472 aaKnown RBP4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 ABCG1P45844 678 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 MAPK9P45984 424 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 SLURP1P55000 103 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 MFAP3P55082 362 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 SLC29A2Q14542 456 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 PSMD6Q15008 389 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 MAPKAPK3Q16644 382 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 KIF19Q2TAC6 998 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 KIAA1324Q6UXG2 1013 aaKnown RBP4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 TMPRSS6Q8IU80 811 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 CBWD2Q8IUF1 395 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 FUKQ8N0W3 1084 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 ZNF843Q8N446 348 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 TBC1D15Q8TC07 691 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 SCFD1Q8WVM8 642 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 IGSF8Q969P0 613 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 EPSTI1Q96J88 318 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 PIWIL1Q96J94 861 aaKnown RBP4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 XPO6Q96QU8 1125 aaKnown RBP4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 MMS19Q96T76 1030 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 SMOQ99835 787 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 NUP58Q9BVL2 599 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 GPR174Q9BXC1 333 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 BBS2Q9BXC9 721 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 MEGF9Q9H1U4 602 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 SNX25Q9H3E2 840 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 DMAP1Q9NPF5 467 aaPredicted RBP4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 HEYLQ9NQ87 328 aaPredicted RBP4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 TBC1D23Q9NUY8 699 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 OSER1Q9NX31 292 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 KIF3AQ9Y496 699 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 RAI2Q9Y5P3 530 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 TCHHQ07283 1943 aa4.79□□□□□ -1.64
CDC42EP3-202ENST00000422687 LRRK2Q5S007 2527 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms