RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 CROTQ9UKG9 612 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 TMEM184BQ9Y519 407 aaPredicted RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 RPS6KL1Q9Y6S9 549 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 SCINQ9Y6U3 715 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 C1orf232A0A0U1RR37 186 aa8□□□□□ -1.13
VIM-202ENST00000421459 BLACEA4D250 179 aa8□□□□□ -1.13
VIM-202ENST00000421459 MATN3O15232 486 aa8□□□□□ -1.13
VIM-202ENST00000421459 GRID2O43424 1007 aa8□□□□□ -1.13
VIM-202ENST00000421459 MTX2O75431 263 aa8□□□□□ -1.13
VIM-202ENST00000421459 KATNA1O75449 491 aa8□□□□□ -1.13
VIM-202ENST00000421459 DNAJB5O75953 348 aa8□□□□□ -1.13
VIM-202ENST00000421459 TIAF1O95411 115 aa8□□□□□ -1.13
VIM-202ENST00000421459 JCHAINP01591 159 aa8□□□□□ -1.13
VIM-202ENST00000421459 SLC4A1P02730 911 aa8□□□□□ -1.13
VIM-202ENST00000421459 MMP2P08253 660 aa8□□□□□ -1.13
VIM-202ENST00000421459 KRT7P08729 469 aa8□□□□□ -1.13
VIM-202ENST00000421459 F3P13726 295 aa8□□□□□ -1.13
VIM-202ENST00000421459 ZNF30P17039 623 aa8□□□□□ -1.13
VIM-202ENST00000421459 NFKBIAP25963 317 aa8□□□□□ -1.13
VIM-202ENST00000421459 DLSTP36957 453 aa8□□□□□ -1.13
VIM-202ENST00000421459 GARSP41250 739 aaKnown RBP8□□□□□ -1.13
VIM-202ENST00000421459 SLC19A1P41440 591 aa8□□□□□ -1.13
VIM-202ENST00000421459 PRKCIP41743 596 aa8□□□□□ -1.13
VIM-202ENST00000421459 CD86P42081 329 aa8□□□□□ -1.13
VIM-202ENST00000421459 UQCRFS1P47985 274 aa8□□□□□ -1.13
VIM-202ENST00000421459 ZNF165P49910 485 aa8□□□□□ -1.13
VIM-202ENST00000421459 ZNF135P52742 658 aaPredicted RBP8□□□□□ -1.13
VIM-202ENST00000421459 PPP1CAP62136 330 aa8□□□□□ -1.13
VIM-202ENST00000421459 UBE2IP63279 158 aaKnown RBP8□□□□□ -1.13
VIM-202ENST00000421459 GBE1Q04446 702 aa8□□□□□ -1.13
VIM-202ENST00000421459 GALNT2Q10471 571 aa8□□□□□ -1.13
VIM-202ENST00000421459 PEX6Q13608 980 aa8□□□□□ -1.13
VIM-202ENST00000421459 LRP8Q14114 963 aa8□□□□□ -1.13
VIM-202ENST00000421459 DPYSL3Q14195 570 aa8□□□□□ -1.13
VIM-202ENST00000421459 GALNT3Q14435 633 aa8□□□□□ -1.13
VIM-202ENST00000421459 QPCTQ16769 361 aa8□□□□□ -1.13
VIM-202ENST00000421459 ANO6Q4KMQ2 910 aa8□□□□□ -1.13
VIM-202ENST00000421459 KHDC1Q4VXA5 237 aaKnown RBP8□□□□□ -1.13
VIM-202ENST00000421459 LACTB2Q53H82 288 aaPredicted RBP8□□□□□ -1.13
VIM-202ENST00000421459 RALGPS1Q5JS13 557 aa8□□□□□ -1.13
VIM-202ENST00000421459 HENMT1Q5T8I9 393 aaKnown RBP8□□□□□ -1.13
VIM-202ENST00000421459 HGSNATQ68CP4 663 aa8□□□□□ -1.13
VIM-202ENST00000421459 SLC9B2Q86UD5 537 aa8□□□□□ -1.13
VIM-202ENST00000421459 NLRP8Q86W28 1048 aa8□□□□□ -1.13
VIM-202ENST00000421459 GPR26Q8NDV2 337 aa8□□□□□ -1.13
VIM-202ENST00000421459 MAML1Q92585 1016 aa8□□□□□ -1.13
VIM-202ENST00000421459 RSC1A1Q92681 617 aa8□□□□□ -1.13
VIM-202ENST00000421459 MIB2Q96AX9 1013 aa8□□□□□ -1.13
VIM-202ENST00000421459 C9orf72Q96LT7 481 aa8□□□□□ -1.13
VIM-202ENST00000421459 PSMG3-AS1Q96PY0 264 aa8□□□□□ -1.13
VIM-202ENST00000421459 TEFMQ96QE5 360 aaKnown RBP8□□□□□ -1.13
VIM-202ENST00000421459 OR6C1Q96RD1 312 aa8□□□□□ -1.13
VIM-202ENST00000421459 NUP85Q9BW27 656 aa8□□□□□ -1.13
VIM-202ENST00000421459 CEP41Q9BYV8 373 aa8□□□□□ -1.13
VIM-202ENST00000421459 ULBP3Q9BZM4 244 aa8□□□□□ -1.13
VIM-202ENST00000421459 OSGEPL1Q9H4B0 414 aa8□□□□□ -1.13
VIM-202ENST00000421459 FAM83DQ9H4H8 585 aa8□□□□□ -1.13
VIM-202ENST00000421459 MRPL47Q9HD33 250 aaKnown RBP8□□□□□ -1.13
VIM-202ENST00000421459 ZNF624Q9P2J8 865 aaPredicted RBP8□□□□□ -1.13
VIM-202ENST00000421459 ANAPC7Q9UJX3 599 aa8□□□□□ -1.13
VIM-202ENST00000421459 ANAPC2Q9UJX6 822 aa8□□□□□ -1.13
VIM-202ENST00000421459 MYO6Q9UM54 1294 aa8□□□□□ -1.13
VIM-202ENST00000421459 SHOC2Q9UQ13 582 aa8□□□□□ -1.13
VIM-202ENST00000421459 DNAJC16Q9Y2G8 782 aa8□□□□□ -1.13
VIM-202ENST00000421459 KCNMB2Q9Y691 235 aa8□□□□□ -1.13
VIM-202ENST00000421459 TLN1Q9Y490 2541 aaKnown RBP8□□□□□ -1.13
VIM-202ENST00000421459 CDC14CA4D256 554 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 OR52A4PA6NMU1 304 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 KCNK1O00180 336 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 CAPN5O15484 640 aaPredicted RBP7.99□□□□□ -1.13
VIM-202ENST00000421459 NUAK1O60285 661 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 KIAA0754O94854 1291 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 UBXN7O94888 489 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 GP1BBP13224 206 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 BRAFP15056 766 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 RPL10P27635 214 aaKnown RBP7.99□□□□□ -1.13
VIM-202ENST00000421459 SERPINB6P35237 376 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 DRG2P55039 364 aaKnown RBP7.99□□□□□ -1.13
VIM-202ENST00000421459 TAS2R40P59535 323 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 TYRO3Q06418 890 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 ZBTB17Q13105 803 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 PIGHQ14442 188 aaPredicted RBP7.99□□□□□ -1.13
VIM-202ENST00000421459 KCNAB1Q14722 419 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 PAFAH1B3Q15102 231 aaKnown RBP7.99□□□□□ -1.13
VIM-202ENST00000421459 TDRD12Q587J7 1177 aaKnown RBP7.99□□□□□ -1.13
VIM-202ENST00000421459 ANKRD20A8PQ5CZ79 823 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 CCDC122Q5T0U0 273 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 ALG1LQ6GMV1 187 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 PPP1R2P3Q6NXS1 205 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 FAM199XQ6PEV8 388 aaPredicted RBP7.99□□□□□ -1.13
VIM-202ENST00000421459 C6orf15Q6UXA7 325 aaPredicted RBP7.99□□□□□ -1.13
VIM-202ENST00000421459 CERS6Q6ZMG9 384 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 FAM92BQ6ZTR7 304 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 ADGRG6Q86SQ4 1221 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 NDUFAF2Q8N183 169 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 PQLC3Q8N755 202 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 CNTD1Q8N815 330 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 FAM71BQ8TC56 605 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 TEKT4Q8WW24 435 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 SH3KBP1Q96B97 665 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms