RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 SPHK2Q9NRA0 654 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 SNX15Q9NRS6 342 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 SUSD2Q9UGT4 822 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 DMGDHQ9UI17 866 aaKnown RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 STYXL1Q9Y6J8 313 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 CHURC1-FNTBB4DL54 471 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 MT-CYBP00156 380 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 DLDP09622 509 aaKnown RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 CASRP41180 1078 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 DUSP3P51452 185 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 ANXA8L1Q5VT79 327 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 SLC30A9Q6PML9 568 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 UGT2B28Q9BY64 529 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 PGAP2Q9UHJ9 254 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 ALPIP09923 528 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 ATP6V1B2P21281 511 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 ATG16L2Q8NAA4 619 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 KLHDC7BQ96G42 594 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 FBRSQ9HAH7 460 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 DNAJC11Q9NVH1 559 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 PIGNO95427 931 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 ITGBL1O95965 494 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 GOT2P00505 430 aaKnown RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 NR2F1P10589 423 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 ZNF23P17027 643 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 CHRNB2P17787 502 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 PNLIPRP1P54315 467 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 PUS10Q3MIT2 529 aaKnown RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 CCNYL2Q5T2Q4 361 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 SLC9B2Q86UD5 537 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 TTLQ8NG68 377 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 FOXJ1Q92949 421 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 CYP2S1Q96SQ9 504 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 SLC2A11Q9BYW1 496 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 FSCN2O14926 492 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 TNFRSF8P28908 595 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 DNAJC14Q6Y2X3 702 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 ABHD13Q7L211 337 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 COMMD2Q86X83 199 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 DEFB119Q8N690 84 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 USE1Q9NZ43 259 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 RBBP6Q7Z6E9 1792 aaKnown RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 TCRBV9S1A1TA0A576 114 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 KDELR3O43731 214 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 SOCS5O75159 536 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 UBXN7O94888 489 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 SRPRAP08240 638 aaKnown RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 CCND1P24385 295 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 PPIDQ08752 370 aaKnown RBP10.67□□□□□ -0.7
PTCH1-206ENST00000421141 IRF2BP1Q8IU81 584 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 LMX1AQ8TE12 382 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 RAB7BQ96AH8 199 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 OR2AG1Q9H205 316 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 EXD2Q9NVH0 621 aa10.67□□□□□ -0.7
PTCH1-206ENST00000421141 ERAL1O75616 437 aaKnown RBP10.66□□□□□ -0.7
PTCH1-206ENST00000421141 CLDN9O95484 217 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 KLK3P07288 261 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ACTR1BP42025 376 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 NAGLUP54802 743 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ACTR1AP61163 376 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 MAPKAPK3Q16644 382 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 RIPOR1Q6ZS17 1223 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 RIT1Q92963 219 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ART4Q93070 314 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 CEP44Q9C0F1 390 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 CYP8B1Q9UNU6 501 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 MFHAS1Q9Y4C4 1052 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 C9IYK1 514 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 DRD1P21728 446 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ASMTP46597 345 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 MASP1P48740 699 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 HCAR3P49019 387 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 TERF2Q15554 542 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 TBC1D25Q3MII6 688 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ZNF549Q6P9A3 640 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 OSTM1Q86WC4 334 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 PEX5LQ8IYB4 626 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 GALNT4Q8N4A0 578 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 NDC1Q9BTX1 674 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 BDH2Q9BUT1 245 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 GPR62Q9BZJ7 368 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ANGPT4Q9Y264 503 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 POU1F1P28069 291 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 NCF4Q15080 339 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 TAF13Q15543 124 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 LRRC36Q1X8D7 754 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 PARP9Q8IXQ6 854 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 DCAF4L2Q8NA75 395 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 NELL2Q99435 816 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 IGKV6D-21A0A0A0MT36 114 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ZNF217O75362 1048 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 STK16O75716 305 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 IPO13O94829 963 aaKnown RBP10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ITPKAP23677 461 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 HSPA13P48723 471 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 BNC1Q01954 994 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 RAB33AQ14088 237 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 FGD3Q5JSP0 725 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 SCUBE1Q8IWY4 988 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 C12orf76Q8N812 135 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms