RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 TNFRSF4P43489 277 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 LIG3P49916 1009 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 SUOXP51687 545 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 BST1Q10588 318 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 CNTN1Q12860 1018 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 PDAP1Q13442 181 aaKnown RBP16.84■□□□□ 0.29
CALD1-204ENST00000417172 ERAP2Q6P179 960 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 ATG14Q6ZNE5 492 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 NUDT18Q6ZVK8 323 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 PELI3Q8N2H9 469 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 HCAR2Q8TDS4 363 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.84■□□□□ 0.291e-7■■■■■ 35.3
CALD1-204ENST00000417172 TSNARE1Q96NA8 513 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 PLEKHG4BQ96PX9 1271 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 C19orf43Q9BQ61 176 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 SARS2Q9NP81 518 aaKnown RBP16.84■□□□□ 0.29
CALD1-204ENST00000417172 SUN2Q9UH99 717 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 MBD1Q9UIS9 605 aaPredicted RBP16.84■□□□□ 0.29
CALD1-204ENST00000417172 H3BMM5 538 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 PRMT5O14744 637 aaPredicted RBP16.84■□□□□ 0.29
CALD1-204ENST00000417172 MTX2O75431 263 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 LTA4HP09960 611 aaKnown RBP16.84■□□□□ 0.29
CALD1-204ENST00000417172 COL6A2P12110 1019 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 ACOX1Q15067 660 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 AADATQ8N5Z0 425 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 RIOK2Q9BVS4 552 aaKnown RBP16.84■□□□□ 0.29
CALD1-204ENST00000417172 SERGEFQ9UGK8 458 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 TSR3Q9UJK0 312 aaKnown RBP16.84■□□□□ 0.29
CALD1-204ENST00000417172 IKZF3Q9UKT9 509 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 NEMP2A6NFY4 417 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 SHISA7A6NL88 538 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 AGAP14A8MT82 685 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 FADS2P1A8MWK0 482 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 TARM1B6A8C7 271 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 AREL1O15033 823 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 BIRC5O15392 142 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 ZBTB14O43829 449 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 ADAM23O75077 832 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 LYPLA1O75608 230 aaPredicted RBP16.83■□□□□ 0.28
CALD1-204ENST00000417172 ARRB2P32121 409 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 DRD3P35462 400 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 B4GALNT1Q00973 533 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 SATB1Q01826 763 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 CAMK2GQ13555 558 aaPredicted RBP16.83■□□□□ 0.28
CALD1-204ENST00000417172 ITGA9Q13797 1035 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 TECRLQ5HYJ1 363 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 TMEM196Q5HYL7 178 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 ZNF648Q5T619 568 aaPredicted RBP16.83■□□□□ 0.28
CALD1-204ENST00000417172 NAPRTQ6XQN6 538 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 CERS6Q6ZMG9 384 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 ERN2Q76MJ5 926 aaKnown RBP16.83■□□□□ 0.28
CALD1-204ENST00000417172 TECPR1Q7Z6L1 1165 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 PIGWQ7Z7B1 504 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 IL17RCQ8NAC3 791 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 HLA-CQ95604 372 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 PTERQ96BW5 349 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 SEC16BQ96JE7 1060 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 TSSK1BQ9BXA7 367 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 FAM83DQ9H4H8 585 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 ALG9Q9H6U8 611 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 TAS2R13Q9NYV9 303 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 VPS9D1Q9Y2B5 631 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 TRPM6Q9BX84 2022 aa16.83■□□□□ 0.28
CALD1-204ENST00000417172 C1QTNF3-AMACRE9PGA6 284 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 PFDN6O15212 129 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 ITM2AO43736 263 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 MMP20O60882 483 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 CHRM3P20309 590 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 COL9A1P20849 921 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 KCNC1P48547 511 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 TFF2Q03403 129 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 CST6Q15828 149 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 ZSCAN26Q16670 478 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 HENMT1Q5T8I9 393 aaKnown RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 PIP5KL1Q5T9C9 394 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 DSG4Q86SJ6 1040 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 RALGPS2Q86X27 583 aaPredicted RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 RBFAQ8N0V3 343 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 CD200R1Q8TD46 325 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 SCG3Q8WXD2 468 aaKnown RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 PPP1R16AQ96I34 528 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 MKRN2Q9H000 416 aaKnown RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 CLPBQ9H078 707 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 NSRP1Q9H0G5 558 aaKnown RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 RSPH9Q9H1X1 276 aaPredicted RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 DYRK4Q9NR20 520 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 OAS3Q9Y6K5 1087 aaKnown RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 SNX3O60493 162 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 KLF8O95600 359 aaPredicted RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 ESR1P03372 595 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 MYL2P10916 166 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 ZNF7P17097 686 aaPredicted RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 TFEBP19484 476 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 COPAP53621 1224 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 ADARP55265 1226 aaKnown RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 SMAD2Q15796 467 aaKnown RBP16.82■□□□□ 0.28
CALD1-204ENST00000417172 FAM83EQ2M2I3 478 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 TSNAXIP1Q2TAA8 658 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 GPR33Q49SQ1 333 aa16.82■□□□□ 0.28
CALD1-204ENST00000417172 KHDC1Q4VXA5 237 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms