RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 OR6C1Q96RD1 312 aa9.92□□□□□ -0.82
MDC1-202ENST00000416571 TBC1D10AQ9BXI6 508 aa9.92□□□□□ -0.82
MDC1-202ENST00000416571 TWSG1Q9GZX9 223 aa9.92□□□□□ -0.82
MDC1-202ENST00000416571 OSGEPL1Q9H4B0 414 aa9.92□□□□□ -0.82
MDC1-202ENST00000416571 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.92□□□□□ -0.82
MDC1-202ENST00000416571 FANCLQ9NW38 375 aa9.92□□□□□ -0.82
MDC1-202ENST00000416571 SIDT1Q9NXL6 827 aaKnown RBP9.92□□□□□ -0.82
MDC1-202ENST00000416571 CPNE7Q9UBL6 633 aa9.92□□□□□ -0.82
MDC1-202ENST00000416571 PLEKHB1Q9UF11 243 aaPredicted RBP9.92□□□□□ -0.82
MDC1-202ENST00000416571 LNPEPQ9UIQ6 1025 aa9.92□□□□□ -0.82
MDC1-202ENST00000416571 TTLL3Q9Y4R7 772 aa9.92□□□□□ -0.82
MDC1-202ENST00000416571 SCINQ9Y6U3 715 aa9.92□□□□□ -0.82
MDC1-202ENST00000416571 PIPSLA2A3N6 862 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 GRID2O43424 1007 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 FZD6O60353 706 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 MTA2O94776 668 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 KIAA0754O94854 1291 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 NDUFA10O95299 355 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 CLDN7O95471 211 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 VIPP01282 170 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 MT-ND3P03897 115 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 SEPHS1P49903 392 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 GFERP55789 205 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 IL11RAQ14626 422 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 BOLA3Q53S33 107 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 POLNQ7Z5Q5 900 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 RAVER1Q8IY67 606 aaKnown RBP9.91□□□□□ -0.82
MDC1-202ENST00000416571 LPCAT1Q8NF37 534 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 CCHCR1Q8TD31 782 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 ELMO2Q96JJ3 720 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 C9orf72Q96LT7 481 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 TGM7Q96PF1 710 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 CSPG4P5Q96PW8 444 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 SMIM14Q96QK8 99 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 ERGIC2Q96RQ1 377 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 TRIM7Q9C029 511 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 MRPL47Q9HD33 250 aaKnown RBP9.91□□□□□ -0.82
MDC1-202ENST00000416571 ETNK2Q9NVF9 386 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 PKD2L2Q9NZM6 624 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 MYO1AQ9UBC5 1043 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 TLK1Q9UKI8 766 aa9.91□□□□□ -0.82
MDC1-202ENST00000416571 OAS3Q9Y6K5 1087 aaKnown RBP9.91□□□□□ -0.82
MDC1-202ENST00000416571 SPTBN1Q01082 2364 aaKnown RBP9.9□□□□□ -0.82
MDC1-202ENST00000416571 C1orf232A0A0U1RR37 186 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 A6NCN8 305 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 K7EM74 188 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 TOX3O15405 576 aaPredicted RBP9.9□□□□□ -0.82
MDC1-202ENST00000416571 CREG1O75629 220 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 UBXN7O94888 489 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 C9P02748 559 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 ZNF28P17035 718 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 TYRP1P17643 537 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 GNLYP22749 145 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 CES1P23141 567 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 PCK1P35558 622 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 GARSP41250 739 aaKnown RBP9.9□□□□□ -0.82
MDC1-202ENST00000416571 UQCRFS1P47985 274 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 ZNF165P49910 485 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 PMS2P54278 862 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 SH3BP2P78314 561 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 KRT81Q14533 505 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 INSCQ1MX18 579 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 ANKRD20A8PQ5CZ79 823 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 HIST2H2BCQ6DN03 193 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 TIGD7Q6NT04 549 aaPredicted RBP9.9□□□□□ -0.82
MDC1-202ENST00000416571 PPP1R3BQ86XI6 285 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 LRRC49Q8IUZ0 686 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 GALNT11Q8NCW6 608 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 CPT1CQ8TCG5 803 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 SSC4DQ8WTU2 575 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 SEC14L1Q92503 715 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 TRIM11Q96F44 468 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 PLEKHG4BQ96PX9 1271 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 TDRD1Q9BXT4 1180 aaKnown RBP9.9□□□□□ -0.82
MDC1-202ENST00000416571 CARD9Q9H257 536 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 FAM83DQ9H4H8 585 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 KLC4Q9NSK0 619 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 LIMA1Q9UHB6 759 aaKnown RBP9.9□□□□□ -0.82
MDC1-202ENST00000416571 PADI1Q9ULC6 663 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 CHKBQ9Y259 395 aa9.9□□□□□ -0.82
MDC1-202ENST00000416571 PCYT1BQ9Y5K3 369 aaPredicted RBP9.9□□□□□ -0.82
MDC1-202ENST00000416571 UTP20O75691 2785 aaKnown RBP9.9□□□□□ -0.83
MDC1-202ENST00000416571 PDZK1P1A8MUH7 402 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 FADS2P1A8MWK0 482 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 NUAK1O60285 661 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 RECKO95980 971 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 FTLP02792 175 aaPredicted RBP9.89□□□□□ -0.83
MDC1-202ENST00000416571 FURINP09958 794 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 MYBL1P10243 752 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 RARAP10276 462 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 GZMAP12544 262 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 XRCC1P18887 633 aaPredicted RBP9.89□□□□□ -0.83
MDC1-202ENST00000416571 IL1R2P27930 398 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 SPINT3P49223 89 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 RPL26P61254 145 aaKnown RBP9.89□□□□□ -0.83
MDC1-202ENST00000416571 MYL5Q02045 173 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 DSC2Q02487 901 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 DNASE1L3Q13609 305 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 ASIC2Q16515 512 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 PLA2G4EQ3MJ16 856 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms