RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 RCOR1Q9UKL0 485 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZNF215Q9UL58 517 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 SUFUQ9UMX1 484 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 DNAJC16Q9Y2G8 782 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 TMEM98Q9Y2Y6 226 aa3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 MAP2P11137 1827 aaKnown RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 TRIP12Q14669 1992 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P23-201ENST00000414981 CFAP65Q6ZU64 1925 aaKnown RBP3.78□□□□□ -1.81
HMGB3P23-201ENST00000414981 TMEM131LA2VDJ0 1609 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 KDRP35968 1356 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 JCADQ9P266 1359 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 ALKQ9UM73 1620 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 CKAP5Q14008 2032 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 A0A1B0GVM2 712 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 A6NLC8 198 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 BTBD18B2RXH4 712 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 IRAK2O43187 625 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 SLC7A4O43246 635 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 ZSCAN12O43309 604 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 DOK2O60496 412 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 ADRB2P07550 413 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 CNPP09543 421 aaKnown RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 UBTFL1P0CB47 393 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 PNMA6AP0CW24 399 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 CKMT1AP12532 417 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 GZMAP12544 262 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 ZNF12P17014 697 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 LIFRP42702 1097 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 TNNT3P45378 269 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 NR1H2P55055 460 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 CCZ1BP86790 482 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 CCZ1P86791 482 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 KIF5AQ12840 1032 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 PSMD6Q15008 389 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 WSCD2Q2TBF2 565 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 PLEKHO1Q53GL0 409 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 EFHC1Q5JVL4 640 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 PRAMEF19Q5SWL8 479 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 GALNTL5Q7Z4T8 443 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 DNAJB7Q7Z6W7 309 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 LUZP1Q86V48 1076 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 TMEM170AQ8WVE7 144 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 HSPH1Q92598 858 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 ATOH1Q92858 354 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 JAKMIP1Q96N16 626 aaKnown RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 ZNF396Q96N95 335 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 PRAM1Q96QH2 718 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 NCAPGQ9BPX3 1015 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 MSTO1Q9BUK6 570 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 UPF3BQ9BZI7 483 aaKnown RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 RPAP3Q9H6T3 665 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 MVB12BQ9H7P6 319 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 WDR6Q9NNW5 1121 aaKnown RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 MTRRQ9UBK8 725 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 FEM1BQ9UK73 627 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 AGO1Q9UL18 857 aaKnown RBP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 ITM2BQ9Y287 266 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 CHD1O14646 1710 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 TCHHQ07283 1943 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 DLG5Q8TDM6 1919 aa3.77□□□□□ -1.81
HMGB3P23-201ENST00000414981 CEP170BQ9Y4F5 1589 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 RGPD1P0DJD0 1748 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 MON2Q7Z3U7 1717 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 CCDC69A6NI79 296 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 VGLL3A8MV65 326 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 AKR1B15C9JRZ8 316 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 HOXC11O43248 304 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 KINO60870 393 aaKnown RBP3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 KCNJ13O60928 360 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 GOSR1O95249 250 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 TGDSO95455 350 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 PPP1R3DO95685 299 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 CHRM4P08173 479 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 RXRAP19793 462 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 CASTP20810 708 aaKnown RBP3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 MYF6P23409 242 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 MCM3P25205 808 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 CNTFP26441 200 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 STIP1P31948 543 aaKnown RBP3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 ABCD1P33897 745 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 PRPHP41219 470 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 PTPN9P43378 593 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 TPD52P55327 224 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 HNRNPH2P55795 449 aaKnown RBP3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 SLC18A2Q05940 514 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 FAM27E3Q08E93 113 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 TBL3Q12788 808 aaKnown RBP3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 CDC16Q13042 620 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 TRAF3Q13114 568 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 IDI1Q13907 227 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 LPIN1Q14693 890 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 SLC18A3Q16572 532 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 KIF19Q2TAC6 998 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 MMEL1Q495T6 779 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 FBXO47Q5MNV8 452 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 NAPEPLDQ6IQ20 393 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 RPUSD3Q6P087 351 aaKnown RBP3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 BLOC1S2Q6QNY1 142 aa3.76□□□□□ -1.81
HMGB3P23-201ENST00000414981 PRSS45Q7RTY3 260 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms