RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ACOX1Q15067 660 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 NAB2Q15742 525 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 EPC2Q52LR7 807 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CEP55Q53EZ4 464 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 RABL3Q5HYI8 236 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 LRIF1Q5T3J3 769 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CES4AQ5XG92 561 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ISM2Q6H9L7 571 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 GSTA5Q7RTV2 222 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ADGRF2Q8IZF7 708 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 MCUQ8NE86 351 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 OR6C4Q8NGE1 309 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 OR14L1PQ8NHC6 308 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 LRRC8CQ8TDW0 803 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 BCL2L2Q92843 193 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 FKBP10Q96AY3 582 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 DTNBP1Q96EV8 351 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 FBXL20Q96IG2 436 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 DGAT2Q96PD7 388 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PLEKHF1Q96S99 279 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ERVMER34-1Q9H9K5 563 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 MAGEE1Q9HCI5 957 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ARL8BQ9NVJ2 186 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TAS2R14Q9NYV8 317 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CACNG4Q9UBN1 327 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CDH22Q9UJ99 828 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 DUSP12Q9UNI6 340 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PRAMEF33A0A0G2JMD5 474 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 A0A1B0GUL7 405 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 LRRC53A6NM62 1247 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 TEX22C9J3V5 150 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 PDHXO00330 501 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 MEIS2O14770 477 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 B4GALT3O60512 393 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 PRAMEF10O60809 474 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 UFL1O94874 794 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 HOXC6P09630 235 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 CD19P15391 556 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 FERP16591 822 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 ERCC2P18074 760 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 LBPP18428 481 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 NDUFS1P28331 727 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 TIA1P31483 386 aaKnown RBP eCLIP2.59□□□□□ -1.99
MCF2-204ENST00000414978 BSGP35613 385 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 JAK3P52333 1124 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 RIPK4P57078 832 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 SUMO2P61956 95 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 WDR5P61964 334 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 RPS7P62081 194 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 CXADRP78310 365 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 MTAPQ13126 283 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 SMC1AQ14683 1233 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 TTC31Q49AM3 519 aaPredicted RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 CAVIN4Q5BKX8 364 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 NKAPLQ5M9Q1 402 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 TTC39AQ5SRH9 613 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 RANBP10Q6VN20 620 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 TADA2BQ86TJ2 420 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 CCDC25Q86WR0 208 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 SETD6Q8TBK2 473 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 PSPC1Q8WXF1 523 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 ROBO4Q8WZ75 1007 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 LPAR1Q92633 364 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 HES6Q96HZ4 224 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 FUT8Q9BYC5 575 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 WNT5BQ9H1J7 359 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 GLRX2Q9NS18 164 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 GMEB2Q9UKD1 530 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 CNOT6Q9ULM6 557 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 PIN4Q9Y237 131 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 NOX1Q9Y5S8 564 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 ETV2O00321 342 aaPredicted RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 PLRG1O43660 514 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 HS6ST1O60243 411 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 GDF11O95390 407 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 CXCL14O95715 111 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 TFPIP10646 304 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 ATP5DP30049 168 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 EIF2S3P41091 472 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 CLCNKAP51800 687 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 MVDP53602 400 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 ZBTB16Q05516 673 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 COX10Q12887 443 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 SNTB1Q13884 538 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 GALNT3Q14435 633 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 CPSF6Q16630 551 aaKnown RBP eCLIP2.59□□□□□ -1.99
MCF2-204ENST00000414978 FAM90A2PQ658T7 463 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 WDR93Q6P2C0 686 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 MICALCLQ6ZW33 695 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 LIMS2Q7Z4I7 341 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 HOOK3Q86VS8 718 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 KRT73Q86Y46 540 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 CAMK1DQ8IU85 385 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 FAM219AQ8IW50 185 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 ANKRD13CQ8N6S4 541 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 LRRC57Q8N9N7 239 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 POMGNT2Q8NAT1 580 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 CNNM3Q8NE01 707 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 ADAMTS17Q8TE56 1095 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 CELF1Q92879 486 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms