RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 FBXO6Q9NRD1 293 aaPredicted RBP14.14□□□□□ -0.15
SF3B1-204ENST00000414963 ZDHHC3Q9NYG2 299 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 CRLS1Q9UJA2 301 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 IQANK1A0A1B0GTG1 560 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 FAM47DPA6NHR8 397 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 GOLGA6L10A6NI86 522 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 K7ESM1 405 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 GPR39O43194 453 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 LAMTOR5O43504 91 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 IGHV4-34P06331 123 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 ITGA2BP08514 1039 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 RPS3P23396 243 aaKnown RBP eCLIP14.13□□□□□ -0.154e-13■□□□□ 8.3
SF3B1-204ENST00000414963 GPR1P46091 355 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 PXNP49023 591 aaPredicted RBP14.13□□□□□ -0.15
SF3B1-204ENST00000414963 ZNF789Q5FWF6 425 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 TMEM31Q5JXX7 168 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 LDLRAP1Q5SW96 308 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 GPRC6AQ5T6X5 926 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 CNSTQ6PJW8 725 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 SLC36A4Q6YBV0 504 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 TIFABQ6ZNK6 161 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 C1orf210Q8IVY1 113 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 MAML2Q8IZL2 1156 aaPredicted RBP14.13□□□□□ -0.15
SF3B1-204ENST00000414963 RBFAQ8N0V3 343 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 PELI3Q8N2H9 469 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 TMEM105Q8N8V8 129 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 PNPLA1Q8N8W4 532 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 DTWD2Q8NBA8 298 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 MZB1Q8WU39 189 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 VPS39Q96JC1 886 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 COPS8Q99627 209 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 GPR22Q99680 433 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 TEX101Q9BY14 249 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 P2RY12Q9H244 342 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 CTNNAL1Q9UBT7 734 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 DMTF1Q9Y222 760 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 COMMD10Q9Y6G5 202 aa14.13□□□□□ -0.15
SF3B1-204ENST00000414963 PLXNA2O75051 1894 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 PRR23AA6NEV1 266 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 SMIM23A6NLE4 172 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 PRMT5O14744 637 aaPredicted RBP14.12□□□□□ -0.15
SF3B1-204ENST00000414963 RAD51BO15315 384 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 RGS16O15492 202 aaPredicted RBP14.12□□□□□ -0.15
SF3B1-204ENST00000414963 SYF2O95926 243 aaKnown RBP14.12□□□□□ -0.15
SF3B1-204ENST00000414963 ESR1P03372 595 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 HOXC4P09017 264 aaPredicted RBP14.12□□□□□ -0.15
SF3B1-204ENST00000414963 ZNF7P17097 686 aaPredicted RBP14.12□□□□□ -0.15
SF3B1-204ENST00000414963 CD9P21926 228 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 IRF4Q15306 451 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 AGBL2Q5U5Z8 902 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 ZNF549Q6P9A3 640 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 WDR5BQ86VZ2 330 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 CYP4X1Q8N118 509 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 FRMD1Q8N878 549 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 PLA2G15Q8NCC3 412 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 RLN3Q8WXF3 142 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 ISL2Q96A47 359 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 COX14Q96I36 57 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 SPACA7Q96KW9 195 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 BIRC8Q96P09 236 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 GPR174Q9BXC1 333 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 STMN4Q9H169 189 aaPredicted RBP14.12□□□□□ -0.15
SF3B1-204ENST00000414963 C6orf106Q9H6K1 298 aaPredicted RBP14.12□□□□□ -0.15
SF3B1-204ENST00000414963 MBNL1Q9NR56 388 aaKnown RBP14.12□□□□□ -0.15
SF3B1-204ENST00000414963 MBD1Q9UIS9 605 aaPredicted RBP14.12□□□□□ -0.15
SF3B1-204ENST00000414963 FBXO4Q9UKT5 387 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 MTO1Q9Y2Z2 717 aaKnown RBP14.12□□□□□ -0.15
SF3B1-204ENST00000414963 PCDHB1Q9Y5F3 818 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 HS3ST3A1Q9Y663 406 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 BPTFQ12830 3046 aa14.12□□□□□ -0.15
SF3B1-204ENST00000414963 METTL12A8MUP2 240 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 TOR1BO14657 336 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 SLC31A1O15431 190 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 OR1I1O60431 355 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 SLC25A14O95258 325 aaPredicted RBP14.11□□□□□ -0.15
SF3B1-204ENST00000414963 HNRNPA2B1P22626 353 aaKnown RBP14.11□□□□□ -0.15
SF3B1-204ENST00000414963 ATP5DP30049 168 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 MAT2AP31153 395 aaKnown RBP14.11□□□□□ -0.15
SF3B1-204ENST00000414963 NSG1P42857 185 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 MAGEA12P43365 314 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 CSRP3P50461 194 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 B4GALNT1Q00973 533 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 POU4F1Q01851 419 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 DMWDQ09019 674 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 MROH9Q5TGP6 573 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 RAET1GQ6H3X3 334 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 MACC1Q6ZN28 852 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 PHYKPLQ8IUZ5 450 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 FAM160A2Q8N612 972 aaPredicted RBP14.11□□□□□ -0.15
SF3B1-204ENST00000414963 KLK6Q92876 244 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 BIRC7Q96CA5 298 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 TLCD1Q96CP7 247 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 HIC2Q96JB3 615 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 AARSD1Q9BTE6 412 aaKnown RBP14.11□□□□□ -0.15
SF3B1-204ENST00000414963 TRIM39Q9HCM9 518 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 MED4Q9NPJ6 270 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 TBK1Q9UHD2 729 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 CRYL1Q9Y2S2 319 aa14.11□□□□□ -0.15
SF3B1-204ENST00000414963 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.11□□□□□ -0.15
SF3B1-204ENST00000414963 VWA7Q9Y334 891 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms