RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 FRG1Q14331 258 aaKnown RBP9.91□□□□□ -0.82
DDB1-202ENST00000414411 KRT72Q14CN4 511 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 C4orf46Q504U0 113 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 AGBL4Q5VU57 503 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 CBARPQ8N350 705 aaPredicted RBP9.91□□□□□ -0.82
DDB1-202ENST00000414411 FBXL6Q8N531 539 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 FAM13CQ8NE31 585 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 TSTD1Q8NFU3 115 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 HMGB4Q8WW32 186 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 RAB7BQ96AH8 199 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 PRR11Q96HE9 360 aaPredicted RBP9.91□□□□□ -0.82
DDB1-202ENST00000414411 HHIPQ96QV1 700 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 TUBB6Q9BUF5 446 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 MAGEE1Q9HCI5 957 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 PCDH12Q9NPG4 1184 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 ARL8BQ9NVJ2 186 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 FBXL12Q9NXK8 326 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 IL1RAPL1Q9NZN1 696 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 USP36Q9P275 1121 aaKnown RBP9.91□□□□□ -0.82
DDB1-202ENST00000414411 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.91□□□□□ -0.82
DDB1-202ENST00000414411 SPO11Q9Y5K1 396 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 GON4LQ3T8J9 2241 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 VPS13AQ96RL7 3174 aa9.91□□□□□ -0.82
DDB1-202ENST00000414411 TRPM6Q9BX84 2022 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 A0A1W2PP55 124 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 CAPN8A6NHC0 703 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 NPIPB15A6NHN6 443 aaPredicted RBP9.9□□□□□ -0.82
DDB1-202ENST00000414411 FCHO1O14526 889 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 PLIN3O60664 434 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 CCDC22O60826 627 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 APBB3O95704 486 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 PRKCGP05129 697 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 ALPIP09923 528 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 ERVK-10P10266 1014 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 CTPS1P17812 591 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 ABL2P42684 1182 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 NPY2RP49146 381 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 TPMTP51580 245 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 EPHB1P54762 984 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 CERCAMQ5T4B2 595 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 N4BP2L1Q5TBK1 243 aaPredicted RBP9.9□□□□□ -0.82
DDB1-202ENST00000414411 ANO7Q6IWH7 933 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 FBXL19Q6PCT2 694 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 CES3Q6UWW8 571 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.9□□□□□ -0.82
DDB1-202ENST00000414411 TMEM135Q86UB9 458 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 LONP2Q86WA8 852 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 CACUL1Q86Y37 369 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 CRLF3Q8IUI8 442 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 HDDC3Q8N4P3 179 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 DNAAF3Q8N9W5 541 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 ISL2Q96A47 359 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 ZNF669Q96BR6 464 aaPredicted RBP9.9□□□□□ -0.82
DDB1-202ENST00000414411 EID2BQ96D98 161 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 FCRL3Q96P31 734 aaPredicted RBP9.9□□□□□ -0.82
DDB1-202ENST00000414411 MIPEPQ99797 713 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 CPNE1Q99829 537 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 C20orf27Q9GZN8 174 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 NMUR2Q9GZQ4 415 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 ZNF395Q9H8N7 513 aaPredicted RBP9.9□□□□□ -0.82
DDB1-202ENST00000414411 C11orf16Q9NQ32 467 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 DYRK4Q9NR20 520 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 BFARQ9NZS9 450 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 TXNDC16Q9P2K2 825 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 FZD4Q9ULV1 537 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 WDR87Q6ZQQ6 2873 aa9.9□□□□□ -0.82
DDB1-202ENST00000414411 MYLKQ15746 1914 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 LRRK1Q38SD2 2015 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 ZCWPW2A0A1B0GU75 182 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 C10orf142B7Z368 130 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 AURKAO14965 403 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 AP1G1O43747 822 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 RNASEH2AO75792 299 aaKnown RBP9.9□□□□□ -0.83
DDB1-202ENST00000414411 USP1O94782 785 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 PIRTP0C851 137 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 TDGF1P13385 188 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 CALB2P22676 271 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 MMP12P39900 470 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 MAGEA12P43365 314 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 PDE1BQ01064 536 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 STX3Q13277 289 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 SMAD1Q15797 465 aaKnown RBP9.9□□□□□ -0.83
DDB1-202ENST00000414411 INSCQ1MX18 579 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 FASTKD1Q53R41 847 aaKnown RBP9.9□□□□□ -0.83
DDB1-202ENST00000414411 LRRC73Q5JTD7 316 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 GRTP1Q5TC63 336 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 CRTC1Q6UUV9 634 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 KIAA1324Q6UXG2 1013 aaKnown RBP9.9□□□□□ -0.83
DDB1-202ENST00000414411 ZCCHC23Q6ZST2 131 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 DPPA4Q7L190 304 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 ALYREFQ86V81 257 aaKnown RBP9.9□□□□□ -0.83
DDB1-202ENST00000414411 KBTBD6Q86V97 674 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 MAML2Q8IZL2 1156 aaPredicted RBP9.9□□□□□ -0.83
DDB1-202ENST00000414411 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.9□□□□□ -0.83
DDB1-202ENST00000414411 BRSK1Q8TDC3 778 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 NSL1Q96IY1 281 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 OMDQ99983 421 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 IL22Q9GZX6 179 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 WWP1Q9H0M0 922 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 CD93Q9NPY3 652 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms