RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	RABIF	P47224	123 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	ARCN1	P48444	511 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	CARS	P49589	748 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	ARL4C	P56559	192 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	NXPH1	P58417	271 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	KIAA1024L	P59773	190 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	CDK3	Q00526	305 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	FZD2	Q14332	565 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	BBS9	Q3SYG4	887 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	ANKRD20A4	Q4UJ75	823 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	KHDC1	Q4VXA5	237 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	DNAJC21	Q5F1R6	531 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	KCTD16	Q68DU8	428 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	PDPK2P	Q6A1A2	396 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	TCEAL6	Q6IPX3	200 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	ASCL5	Q7RTU5	278 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	CCDC91	Q7Z6B0	441 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	PTAR1	Q7Z6K3	402 aa	Predicted RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	RABEPK	Q7Z6M1	372 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	PIANP	Q8IYJ0	282 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	PDIK1L	Q8N165	341 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	TCEAL3	Q969E4	200 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	HDAC10	Q969S8	669 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	LRRC39	Q96DD0	335 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	KLHDC7B	Q96G42	594 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	HIC2	Q96JB3	615 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	VPS35	Q96QK1	796 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	EBNA1BP2	Q99848	306 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	RHOXF2	Q9BQY4	288 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	SPATA16	Q9BXB7	569 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	FAM129A	Q9BZQ8	928 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	PHACTR1	Q9C0D0	580 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	WDR26	Q9H7D7	661 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	CAAP1	Q9H8G2	361 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	UGT1A7	Q9HAW7	530 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	UGT1A10	Q9HAW8	530 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	UGT1A8	Q9HAW9	530 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	PARD6A	Q9NPB6	346 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	FSCN3	Q9NQT6	498 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	FAM114A2	Q9NRY5	505 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	APPL1	Q9UKG1	709 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	ANKRD6	Q9Y2G4	727 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	OAS3	Q9Y6K5	1087 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	FAM186A	A6NE01	2351 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	ASCC3	Q8N3C0	2202 aa	Known RBP	10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	SPTY2D1-AS1	A0A0U1RR47	76 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	TMEM202	A6NGA9	273 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	OR51F1	A6NGY5	319 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	LRP3	O75074	770 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	USP1	O94782	785 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	PRAMEF1	O95521	474 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	FUCA1	P04066	466 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	PYGL	P06737	847 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	PRSS56	P0CW18	603 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	MYCLP1	P12525	358 aa	Predicted RBP	10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	FOXN2	P32314	431 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	ELK3	P41970	407 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	CDKN1C	P49918	316 aa	Predicted RBP	10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	HNRNPH2	P55795	449 aa	Known RBP	10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	IRX4	P78413	519 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	GRIK2	Q13002	908 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	EIF2B5	Q13144	721 aa	Known RBP	10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	NFATC2	Q13469	925 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	PDE1C	Q14123	709 aa	Predicted RBP	10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	NFATC4	Q14934	902 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	KIF19	Q2TAC6	998 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	TRIM61	Q5EBN2	209 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	TEX35	Q5T0J7	233 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	STEAP4	Q687X5	459 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	CASC4	Q6P4E1	433 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	MACC1	Q6ZN28	852 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	TRIM74	Q86UV6	250 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	DCP2	Q8IU60	420 aa	Known RBP	10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZNF398	Q8TD17	642 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	BTN2A2	Q8WVV5	523 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	GLYATL1	Q969I3	302 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	CCDC97	Q96F63	343 aa	Predicted RBP	10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	STAMBPL1	Q96FJ0	436 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	ANKZF1	Q9H8Y5	726 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	SMOX	Q9NWM0	555 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	SAMD15	Q9P1V8	674 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	GMEB2	Q9UKD1	530 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	SLC6A14	Q9UN76	642 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	SNX11	Q9Y5W9	270 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	MAD1L1	Q9Y6D9	718 aa		10.19	□□□□□ -0.78
ZNF3-205	ENST00000413658	IGLV3-16	A0A075B6K0	115 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	INPP4B	O15327	924 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	EIF3H	O15372	352 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	COQ9	O75208	318 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	GOT2	P00505	430 aa	Known RBP	10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	CFI	P05156	583 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	CEACAM5	P06731	702 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	PGAM1	P18669	254 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	MC4R	P32245	332 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	SPEM2	Q0P670	501 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	PDIA2	Q13087	525 aa	Known RBP	10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	CUL1	Q13616	776 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	ITGA9	Q13797	1035 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms