RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 SLC39A1Q9NY26 324 aa19.01■□□□□ 0.63
CPSF7-204ENST00000413232 PKD2L2Q9NZM6 624 aa19.01■□□□□ 0.63
CPSF7-204ENST00000413232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.01■□□□□ 0.634e-11■■□□□ 12.6
CPSF7-204ENST00000413232 GRID2O43424 1007 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 SLC28A2O43868 658 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 NUAK1O60285 661 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 SNX2O60749 519 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 AP1B1Q10567 949 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 CLCA4Q14CN2 919 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 ALS2CLQ60I27 953 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 ARHGAP22Q7Z5H3 698 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 FAM129CQ86XR2 697 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 OR10G6Q8NH81 332 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 SPATA22Q8NHS9 363 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 CCHCR1Q8TD31 782 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 TADA1Q96BN2 335 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 IMP4Q96G21 291 aaKnown RBP19■□□□□ 0.63
CPSF7-204ENST00000413232 AHCYL2Q96HN2 611 aaKnown RBP19■□□□□ 0.63
CPSF7-204ENST00000413232 OLFM3Q96PB7 478 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 CTRCQ99895 268 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 DDA1Q9BW61 102 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 TBC1D10AQ9BXI6 508 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 SPRY4Q9C004 299 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 ZFYVE1Q9HBF4 777 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 PRDM8Q9NQV8 689 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 STARD5Q9NSY2 213 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 SPTLC3Q9NUV7 552 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 SCHIP1Q9P0W5 487 aaPredicted RBP19■□□□□ 0.63
CPSF7-204ENST00000413232 SLC23A2Q9UGH3 650 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 HYOU1Q9Y4L1 999 aa19■□□□□ 0.63
CPSF7-204ENST00000413232 SSU72P8A0A1W2PR75 194 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 RGSL1A5PLK6 1076 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 B4E171 279 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 F3P13726 295 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 LIFP15018 202 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 TSPAN7P41732 249 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 WDR74Q6RFH5 385 aaPredicted RBP18.99■□□□□ 0.63
CPSF7-204ENST00000413232 TMC3Q7Z5M5 1100 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 NCSTNQ92542 709 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 RNF25Q96BH1 459 aaPredicted RBP18.99■□□□□ 0.63
CPSF7-204ENST00000413232 DPYSL5Q9BPU6 564 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 ARHGAP9Q9BRR9 750 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 ADGRE3Q9BY15 652 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 OR2AG1Q9H205 316 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 CARD9Q9H257 536 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 RMI1Q9H9A7 625 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 APMAPQ9HDC9 416 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 HAUS2Q9NVX0 235 aa18.99■□□□□ 0.63
CPSF7-204ENST00000413232 ZNF487B1APH4 448 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 APOL1O14791 398 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 AURKAO14965 403 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 DUX1O43812 170 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 AKR1B10O60218 316 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 MT-CYBP00156 380 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-204ENST00000413232 SLC4A1P02730 911 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 NOP2P46087 812 aaKnown RBP18.98■□□□□ 0.63
CPSF7-204ENST00000413232 PPM1FP49593 454 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-204ENST00000413232 PCSK7Q16549 785 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 KHDC1Q4VXA5 237 aaKnown RBP18.98■□□□□ 0.63
CPSF7-204ENST00000413232 PRICKLE2Q7Z3G6 844 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 ADGRG6Q86SQ4 1221 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 NT5DC3Q86UY8 548 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 IL22RA1Q8N6P7 574 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 ZSCAN1Q8NBB4 408 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 RTP4Q96DX8 246 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 ZNF830Q96NB3 372 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-204ENST00000413232 PLEKHG4BQ96PX9 1271 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 SPATA16Q9BXB7 569 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 SAE1Q9UBE0 346 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-204ENST00000413232 CPNE7Q9UBL6 633 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 PILRAQ9UKJ1 303 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 TMPRSS11EQ9UL52 423 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 SPO11Q9Y5K1 396 aa18.98■□□□□ 0.63
CPSF7-204ENST00000413232 RAD1O60671 282 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 MTX2O75431 263 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 MTA2O94776 668 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 SLC25A14O95258 325 aaPredicted RBP18.97■□□□□ 0.63
CPSF7-204ENST00000413232 MAPK9P45984 424 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 DYNLT1P63172 113 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 UBE2IP63279 158 aaKnown RBP18.97■□□□□ 0.63
CPSF7-204ENST00000413232 MC2RQ01718 297 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 LLGL1Q15334 1064 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 DCAF12Q5T6F0 453 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 CRTC3Q6UUV7 619 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 TIPARPQ7Z3E1 657 aaKnown RBP18.97■□□□□ 0.63
CPSF7-204ENST00000413232 SLC9B2Q86UD5 537 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 CACNA2D3Q8IZS8 1091 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 HERPUD2Q9BSE4 406 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 TRIM4Q9C037 500 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 ZMYND15Q9H091 742 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 SLC25A51Q9H1U9 297 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 DEF6Q9H4E7 631 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 MAGEE1Q9HCI5 957 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 TRIM39Q9HCM9 518 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 KLC4Q9NSK0 619 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 ABHD10Q9NUJ1 306 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 OGFRQ9NZT2 677 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 KLHL3Q9UH77 587 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 LCMT1Q9UIC8 334 aa18.97■□□□□ 0.63
CPSF7-204ENST00000413232 ZNF711Q9Y462 761 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms