RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 NXPE1Q8N323 547 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 PNPLA1Q8N8W4 532 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 RDH11Q8TC12 318 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 KCNV2Q8TDN2 545 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 ZNF473Q8WTR7 871 aaKnown RBP11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 ZNF75CPQ92670 426 aaPredicted RBP11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 RAB7BQ96AH8 199 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 CCT8L2Q96SF2 557 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 SPATA16Q9BXB7 569 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 MANSC1Q9H8J5 431 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 FBRSQ9HAH7 460 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 SYTL2Q9HCH5 934 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 FBRSL1Q9HCM7 1045 aaKnown RBP11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 HEBP1Q9NRV9 189 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 HCN2Q9UL51 889 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 EMCNQ9ULC0 261 aa11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 RUVBL2Q9Y230 463 aaKnown RBP11.54□□□□□ -0.56
SNRNP35-202ENST00000412157 H0Y858 1186 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 NEMP1O14524 444 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 EGFP01133 1207 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 MYL2P10916 166 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 CPA3P15088 417 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 UGT1A6P19224 532 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 BGNP21810 368 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 UGT1A1P22309 533 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 UGT1A4P22310 534 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 RPS3P23396 243 aaKnown RBP eCLIP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 UGT1A3P35503 534 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 UGT1A5P35504 534 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 GMPRP36959 345 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 KIR2DL1P43626 348 aaPredicted RBP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 ADARP55265 1226 aaKnown RBP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 CAMK2GQ13555 558 aaPredicted RBP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 CSHL1Q14406 222 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 SMAD2Q15796 467 aaKnown RBP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 CST6Q15828 149 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 TMEM196Q5HYL7 178 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 LIPIQ6XZB0 460 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 ZNF771Q7L3S4 317 aaPredicted RBP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 HSD11B1LQ7Z5J1 315 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 RAVER1Q8IY67 606 aaKnown RBP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 NRSN1Q8IZ57 195 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 CENPLQ8N0S6 344 aaPredicted RBP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 TRAM1L1Q8N609 369 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 OR2T3Q8NH03 318 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 CXorf40AQ8TE69 158 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 NXNL1Q96CM4 212 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 GRAMD1AQ96CP6 724 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 COPS8Q99627 209 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 WRAP53Q9BUR4 548 aaKnown RBP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 HDAC8Q9BY41 377 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 RSPH9Q9H1X1 276 aaPredicted RBP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 FAM83DQ9H4H8 585 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 FGFR1OP2Q9NVK5 253 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 ZNF358Q9NW07 568 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 ZDHHC3Q9NYG2 299 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 COPG2Q9UBF2 871 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 TRMT6Q9UJA5 497 aaKnown RBP11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 ITM2BQ9Y287 266 aa11.53□□□□□ -0.56
SNRNP35-202ENST00000412157 CFAP99D6REC4 459 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 F8W8V4 182 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 WNT9AO14904 365 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 GPR39O43194 453 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 LZTS3O60299 673 aaPredicted RBP11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 OR1I1O60431 355 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 NIPSNAP2O75323 286 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 KLF8O95600 359 aaPredicted RBP11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 ASGR2P07307 311 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 RBP1P09455 135 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 CCDC166P0CW27 439 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 SRFP11831 508 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 HOXB2P14652 356 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 ZNF37AP17032 561 aaPredicted RBP11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 C5AR1P21730 350 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 CD9P21926 228 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 ALDH3A1P30838 453 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 GLRBP48167 497 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 LIG3P49916 1009 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 METAP1P53582 386 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 PGGT1BP53609 377 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 PRKAA2P54646 552 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 MRPS21P82921 87 aaKnown RBP11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 NHLH1Q02575 133 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 ASPHQ12797 758 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 PCLAFQ15004 111 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 CHI3L2Q15782 390 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 TMEM52BQ4KMG9 183 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 C2orf27AQ580R0 203 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 CTSL3PQ5NE16 218 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 GKAP1Q5VSY0 366 aaPredicted RBP11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 FAM47EQ6ZV65 393 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 PIM3Q86V86 326 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 NKAPQ8N5F7 415 aaKnown RBP11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 DTX3LQ8TDB6 740 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 HEXDCQ8WVB3 486 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 KCNJ9Q92806 393 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 ERLEC1Q96DZ1 483 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 DCUN1D1Q96GG9 259 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 GPR21Q99679 349 aa11.52□□□□□ -0.57
SNRNP35-202ENST00000412157 GABRG3Q99928 467 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms