RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 IMP4Q96G21 291 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-203ENST00000411971 SLC38A3Q99624 504 aa16.32■□□□□ 0.2
SCAMP4-203ENST00000411971 MLPHQ9BV36 600 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-203ENST00000411971 B3GNT4Q9C0J1 378 aa16.32■□□□□ 0.2
SCAMP4-203ENST00000411971 STARD5Q9NSY2 213 aa16.32■□□□□ 0.2
SCAMP4-203ENST00000411971 OGFRQ9NZT2 677 aa16.32■□□□□ 0.2
SCAMP4-203ENST00000411971 RPL26L1Q9UNX3 145 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-203ENST00000411971 SPO11Q9Y5K1 396 aa16.32■□□□□ 0.2
SCAMP4-203ENST00000411971 PRR19A6NJB7 356 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 STMND1H3BQB6 276 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 NUAK1O60285 661 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 MTX2O75431 263 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 MT-CYBP00156 380 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 TMEM253P0C7T8 217 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 CD82P27701 267 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 GPLD1P80108 840 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 ADCY2Q08462 1091 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 LLGL1Q15334 1064 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 ADGRG6Q86SQ4 1221 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 FAM129CQ86XR2 697 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 RTP4Q96DX8 246 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 AGAP3Q96P47 875 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 OR2AG1Q9H205 316 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 SARS2Q9NP81 518 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 SLC39A1Q9NY26 324 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 SEPT10Q9P0V9 454 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 SAE1Q9UBE0 346 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 PILRAQ9UKJ1 303 aa16.31■□□□□ 0.2
SCAMP4-203ENST00000411971 COL12A1Q99715 3063 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 GOLGA6L19H0YKK7 550 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 GRID2O43424 1007 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 DUX1O43812 170 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 SLC4A1P02730 911 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 ITGB2P05107 769 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 PYGLP06737 847 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 MX2P20592 715 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 CSTF2P33240 577 aaKnown RBP eCLIP16.3■□□□□ 0.26e-8■□□□□ 9.6
SCAMP4-203ENST00000411971 GFERP55789 205 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 UBE2IP63279 158 aaKnown RBP16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 TPM4P67936 248 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 AP1B1Q10567 949 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 PCSK7Q16549 785 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 PLA2G4EQ3MJ16 856 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 CRTC3Q6UUV7 619 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 PRICKLE2Q7Z3G6 844 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 TMC3Q7Z5M5 1100 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 ZNF547Q8IVP9 402 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 MAP7D3Q8IWC1 876 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 UNC5BQ8IZJ1 945 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 NCSTNQ92542 709 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 RNF25Q96BH1 459 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 IQCDQ96DY2 449 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 PLEKHG4BQ96PX9 1271 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 DDA1Q9BW61 102 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 UBP1Q9NZI7 540 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 PKD2L2Q9NZM6 624 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 ZNF624Q9P2J8 865 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 KLHL3Q9UH77 587 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 ZNF711Q9Y462 761 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 PCDHB11Q9Y5F2 797 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 SLC30A1Q9Y6M5 507 aa16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 UBR5O95071 2799 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-203ENST00000411971 LOC101059948A0A1B0GTJ6 334 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 B4E171 279 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 GPR39O43194 453 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 RAD1O60671 282 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 F3P13726 295 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 BPIP17213 487 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 CD68P34810 354 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 TSPAN7P41732 249 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 MAPK9P45984 424 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 DYNLT1P63172 113 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 ZFYVE27Q5T4F4 411 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 TMEM164Q5U3C3 297 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 MFSD7Q6UXD7 560 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 RAVER1Q8IY67 606 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 CACNA2D3Q8IZS8 1091 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 OR8K1Q8NGG5 319 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 OR10G6Q8NH81 332 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 SPATA16Q9BXB7 569 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 CARD9Q9H257 536 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 GOLPH3Q9H4A6 298 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 ZFYVE1Q9HBF4 777 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 KLC4Q9NSK0 619 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 AKAP7Q9P0M2 348 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 CPNE7Q9UBL6 633 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 DNPEPQ9ULA0 475 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 RELNP78509 3460 aa16.29■□□□□ 0.2
SCAMP4-203ENST00000411971 HECTD1Q9ULT8 2610 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 SSU72P8A0A1W2PR75 194 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 F5H423 210 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 APOL1O14791 398 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 CHUKO15111 745 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 MTA2O94776 668 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 KRT1P04264 644 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 TNNT1P13805 278 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 BRAFP15056 766 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 PECAM1P16284 738 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 CA4P22748 312 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 SLC19A1P41440 591 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms