RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 MATN3O15232 486 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 GRID2O43424 1007 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ANKRD34CP0C6C1 535 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ZNF28P17035 718 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 CA4P22748 312 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 IL4RP24394 825 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 DLSTP36957 453 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 GARSP41250 739 aaKnown RBP14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 SPINT3P49223 89 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 GFERP55789 205 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 MAP7Q14244 749 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 HENMT1Q5T8I9 393 aaKnown RBP14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ALG1LQ6GMV1 187 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 C6orf15Q6UXA7 325 aaPredicted RBP14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 PHYKPLQ8IUZ5 450 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 LURAP1LQ8IV03 231 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 FAM26EQ8N5C1 309 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 AOPEPQ8N6M6 819 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ARRDC2Q8TBH0 407 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 MAML1Q92585 1016 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 BTBD6Q96KE9 485 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 PLEKHG4BQ96PX9 1271 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ULBP3Q9BZM4 244 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 PCDH9Q9HC56 1237 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 SIDT1Q9NXL6 827 aaKnown RBP14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 PKD2L2Q9NZM6 624 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 KCTD3Q9Y597 815 aa14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 MN1Q10571 1320 aaPredicted RBP14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 RELNP78509 3460 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 LILRA5A6NI73 299 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 K7EM74 188 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 MTSS1O43312 755 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 MFSD11O43934 449 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 NUAK1O60285 661 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 CD48P09326 243 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 NR1D1P20393 614 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 CCNCP24863 283 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 SSR1P43307 286 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 SEPHS1P49903 392 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 RPL26P61254 145 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 SLC25A11Q02978 314 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 NIPAL4Q0D2K0 466 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 GALNT2Q10471 571 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ERV3-1Q14264 604 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 IFI16Q16666 785 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ANKRD20A8PQ5CZ79 823 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 TIGD7Q6NT04 549 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 TEX19Q8NA77 164 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 AVL9Q8NBF6 648 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 GALNT6Q8NCL4 622 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 CCHCR1Q8TD31 782 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 MIB2Q96AX9 1013 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 C9orf72Q96LT7 481 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 LYSMD1Q96S90 227 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 CARD9Q9H257 536 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 OSGEPL1Q9H4B0 414 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ARFGAP3Q9NP61 516 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 KLC4Q9NSK0 619 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 HAUS2Q9NVX0 235 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 OGFRQ9NZT2 677 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 RCOR3Q9P2K3 495 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ATXN10Q9UBB4 475 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 IP6K2Q9UHH9 426 aa14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 RPL26L1Q9UNX3 145 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB2-229ENST00000411527 MKRN2OSH3BPM6 223 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 KATNA1O75449 491 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 VIPP01282 170 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 C9P02748 559 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ZNF8P17098 575 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 TYRP1P17643 537 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 AMD1P17707 334 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 XRCC1P18887 633 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 MLLT10P55197 1068 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 UBE2IP63279 158 aaKnown RBP14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 SH3BP2P78314 561 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 PAFAH1B3Q15102 231 aaKnown RBP14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 QPCTQ16769 361 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ZNF648Q5T619 568 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 NCBP2-AS2Q69YL0 99 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 CLEC17AQ6ZS10 378 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 TMEM26Q6ZUK4 368 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ATCAYQ86WG3 371 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 RASGRP3Q8IV61 690 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 NIPA2Q8N8Q9 360 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 FAM71BQ8TC56 605 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 LRRN4Q8WUT4 740 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ELMO2Q96JJ3 720 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 TGM7Q96PF1 710 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 PSMG3-AS1Q96PY0 264 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 OR6C1Q96RD1 312 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 MLPHQ9BV36 600 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 OR2AG1Q9H205 316 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 SCHIP1Q9P0W5 487 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 AMACRQ9UHK6 382 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ANAPC7Q9UJX3 599 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 CROTQ9UKG9 612 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 SLC30A1Q9Y6M5 507 aa14.06□□□□□ -0.16
HLA-DQB2-229ENST00000411527 BLACEA4D250 179 aa14.05□□□□□ -0.16
HLA-DQB2-229ENST00000411527 RGSL1A5PLK6 1076 aa14.05□□□□□ -0.16
HLA-DQB2-229ENST00000411527 ANKRD66B4E2M5 251 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms