RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CRACR2AQ9BSW2 395 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 FZD8Q9H461 694 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 PAPOLBQ9NRJ5 636 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 GAR1Q9NY12 217 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 HMG20BQ9P0W2 317 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 LARSQ9P2J5 1176 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 EXTL2Q9UBQ6 330 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 SLC24A2Q9UI40 661 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 EXOC7Q9UPT5 735 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 TNFSF13BQ9Y275 285 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 KIF3AQ9Y496 699 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 HEMK1Q9Y5R4 338 aaPredicted RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 A0A0B4J293 547 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 C1orf226A1L170 272 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 WDR27A2RRH5 827 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 TYW5A2RUC4 315 aaKnown RBP4.91□□□□□ -1.62
LSM5-205ENST00000409952 CGB1A6NKQ9 187 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 HSPB2A8KAH6 182 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 YDJCA8MPS7 323 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 FAM86B1E9PN63 330 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 H0YIN7 160 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 KIF1CO43896 1103 aaKnown RBP4.91□□□□□ -1.62
LSM5-205ENST00000409952 PEX11AO75192 247 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 AKAP3O75969 853 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 ZNF202O95125 648 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 RLN1P04808 185 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 NPSP0C0P6 89 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 FAM86B2P0C5J1 330 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 EPORP19235 508 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 PCSK6P29122 969 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 CTNNB1P35222 781 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 PRCPP42785 496 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 HSPB2Q16082 182 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 SMN1Q16637 294 aaKnown RBP4.91□□□□□ -1.62
LSM5-205ENST00000409952 TEX38Q6PEX7 206 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 ZNF474Q6S9Z5 364 aaPredicted RBP4.91□□□□□ -1.62
LSM5-205ENST00000409952 DHRS13Q6UX07 377 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 RANBP10Q6VN20 620 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 NHLRC1Q6VVB1 395 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 MEX3BQ6ZN04 569 aaKnown RBP4.91□□□□□ -1.62
LSM5-205ENST00000409952 HAPLN4Q86UW8 402 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 RFX6Q8HWS3 928 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 SLC4A11Q8NBS3 891 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 GMCL1P1Q8NEA9 526 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 NEK11Q8NG66 645 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 OR4N2Q8NGD1 307 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 HUS1BQ8NHY5 278 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 CCDC110Q8TBZ0 833 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 RFKQ969G6 155 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 IGSF8Q969P0 613 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 LENG9Q96B70 501 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 PTCD3Q96EY7 689 aaKnown RBP4.91□□□□□ -1.62
LSM5-205ENST00000409952 THAP7Q9BT49 309 aaPredicted RBP4.91□□□□□ -1.62
LSM5-205ENST00000409952 SCNM1Q9BWG6 230 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 FSD1LQ9BXM9 530 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 EPB41L5Q9HCM4 733 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 AKIP1Q9NQ31 210 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 PRMT8Q9NR22 394 aaPredicted RBP4.91□□□□□ -1.62
LSM5-205ENST00000409952 DUSP22Q9NRW4 184 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 MTMR10Q9NXD2 777 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 ZNF624Q9P2J8 865 aaPredicted RBP4.91□□□□□ -1.62
LSM5-205ENST00000409952 FBXW2Q9UKT8 454 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 ACEP12821 1306 aa4.91□□□□□ -1.62
LSM5-205ENST00000409952 A0A1W2PPM1 405 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 C5orf52A6NGY3 159 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 VWC2LB2RUY7 222 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 KLRF2D3W0D1 207 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 CLIC1O00299 241 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 ATP2A1O14983 1001 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 ZBTB43O43298 467 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 NCR1O76036 304 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 MMP2P08253 660 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 CD63P08962 238 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 GHRP10912 638 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 AKR1A1P14550 325 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 ENGP17813 658 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 ARF4P18085 180 aaPredicted RBP4.9□□□□□ -1.63
LSM5-205ENST00000409952 NR4A1P22736 598 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 EEF1B2P24534 225 aaKnown RBP4.9□□□□□ -1.63
LSM5-205ENST00000409952 DDX6P26196 483 aaKnown RBP eCLIP4.9□□□□□ -1.63
LSM5-205ENST00000409952 ZFP36P26651 326 aaKnown RBP4.9□□□□□ -1.63
LSM5-205ENST00000409952 CD27P26842 260 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 ARFIP1P53367 373 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 ADORA2A-AS1P86434 159 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 KRT33BQ14525 404 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 SGCBQ16585 318 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 AARDQ4LEZ3 155 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 ATP13A5Q4VNC0 1218 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 RNASE12Q5GAN4 147 aaKnown RBP4.9□□□□□ -1.63
LSM5-205ENST00000409952 KCNT1Q5JUK3 1230 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 ZCCHC12Q6PEW1 402 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 Q6ZPA2 131 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 DET1Q7L5Y6 550 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 NOXA1Q86UR1 476 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 RASAL3Q86YV0 1011 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 UXS1Q8NBZ7 420 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 GJC3Q8NFK1 279 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 URGCPQ8TCY9 931 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms