RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 KIF5BP33176 963 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 PSMC2P35998 433 aaKnown RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 SLC1A4P43007 532 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 GNAQP50148 359 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 BACE1P56817 501 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 SPP2Q13103 211 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 NFATC4Q14934 902 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 TAF12Q16514 161 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 KRTAP27-1Q3LI81 207 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 GPATCH4Q5T3I0 446 aaKnown RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 CST9Q5W186 159 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 ATG16L1Q676U5 607 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 CPLX2Q6PUV4 134 aaKnown RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 FAM83HQ6ZRV2 1179 aaPredicted RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 USP43Q70EL4 1123 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 ARMC9Q7Z3E5 817 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 SMAP1Q8IYB5 467 aaPredicted RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 HORMAD2Q8N7B1 307 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 CLEC18CQ8NCF0 446 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 MCPH1Q8NEM0 835 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 RFWD2Q8NHY2 731 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 SLC35F5Q8WV83 523 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 NEUROG1Q92886 237 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 LZTS2Q9BRK4 669 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 PHF7Q9BWX1 381 aaPredicted RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 LMAN2LQ9H0V9 348 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 CPVLQ9H3G5 476 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 SH2D4AQ9H788 454 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 CATSPERBQ9H7T0 1116 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 CHMP5Q9NZZ3 219 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 ORC3Q9UBD5 711 aaPredicted RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 IL36RNQ9UBH0 155 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 PLEKHB1Q9UF11 243 aaPredicted RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 NAP1L2Q9ULW6 460 aaPredicted RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 MTMR6Q9Y217 621 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 MYH7BA7E2Y1 1941 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 LCTP09848 1927 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 A0A096LPK6 155 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 MS4A18H0YCH9 400 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 CXCL11O14625 94 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 WDR46O15213 610 aaKnown RBP4.47□□□□□ -1.69
CLK1-203ENST00000409769 NCAM2O15394 837 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 STX6O43752 255 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 GUCY1B2O75343 617 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 CELF2O95319 508 aaKnown RBP4.47□□□□□ -1.69
CLK1-203ENST00000409769 CLDN7O95471 211 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 CYP1A2P05177 515 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 SCG2P13521 617 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 HOXD3P31249 432 aaPredicted RBP4.47□□□□□ -1.69
CLK1-203ENST00000409769 PTPN9P43378 593 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 PPM1FP49593 454 aaPredicted RBP4.47□□□□□ -1.69
CLK1-203ENST00000409769 BLKP51451 505 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 GAS1P54826 345 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 CDH12P55289 794 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 NUCB2P80303 420 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 SLC18A2Q05940 514 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 Q0VFX4 171 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 PPIL2Q13356 520 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 DNTTIP2Q5QJE6 756 aaKnown RBP4.47□□□□□ -1.69
CLK1-203ENST00000409769 OTUD1Q5VV17 481 aaPredicted RBP4.47□□□□□ -1.69
CLK1-203ENST00000409769 RETSATQ6NUM9 610 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 C17orf99Q6UX52 265 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 CLEC17AQ6ZS10 378 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 PRSS45Q7RTY3 260 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 CTU1Q7Z7A3 348 aaKnown RBP4.47□□□□□ -1.69
CLK1-203ENST00000409769 PATL1Q86TB9 770 aaKnown RBP4.47□□□□□ -1.69
CLK1-203ENST00000409769 ERO1BQ86YB8 467 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 ZNF713Q8N859 430 aaPredicted RBP4.47□□□□□ -1.69
CLK1-203ENST00000409769 CEP76Q8TAP6 659 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 OIT3Q8WWZ8 545 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 HSPH1Q92598 858 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 PHF21BQ96EK2 531 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.47□□□□□ -1.69
CLK1-203ENST00000409769 SLC26A6Q9BXS9 759 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 UBA5Q9GZZ9 404 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 RANBP17Q9H2T7 1088 aaKnown RBP4.47□□□□□ -1.69
CLK1-203ENST00000409769 CXorf56Q9H5V9 222 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 JMJD4Q9H9V9 463 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 ENTPD7Q9NQZ7 604 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 SH3GLB2Q9NR46 395 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 MYO6Q9UM54 1294 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 ZHX2Q9Y6X8 837 aa4.47□□□□□ -1.69
CLK1-203ENST00000409769 ZNFX1Q9P2E3 1918 aaKnown RBP4.46□□□□□ -1.69
CLK1-203ENST00000409769 ESYT2A0FGR8 921 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 I6L893 689 aaPredicted RBP4.46□□□□□ -1.7
CLK1-203ENST00000409769 EBAG9O00559 213 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 ZBTB5O15062 677 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 RGS14O43566 566 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 CBX6O95503 412 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 IL1AP01583 271 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 MMP1P03956 469 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 U2AF2P26368 475 aaKnown RBP eCLIP4.46□□□□□ -1.75e-8■■■□□ 15.8
CLK1-203ENST00000409769 PPP3CCP48454 512 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 STAT2P52630 851 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 HMGCS2P54868 508 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 ADORA2A-AS1P86434 159 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 TRAF1Q13077 416 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 GPS2Q13227 327 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 GPR18Q14330 331 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms