RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 UGT1A8Q9HAW9 530 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 CAPN10Q9HC96 672 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 CATSPERZQ9NTU4 200 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 CRLS1Q9UJA2 301 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 SPTY2D1-AS1A0A0U1RR47 76 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 A0A1B0GVT2 93 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 CFIP05156 583 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 GSTA2P09210 222 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 MCM3P25205 808 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 ACRV1P26436 265 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 CA5AP35218 305 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 NHLH1Q02575 133 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 TRIM61Q5EBN2 209 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 AARS2Q5JTZ9 985 aaKnown RBP16.47■□□□□ 0.23
SUMO1-208ENST00000409627 TPRG1LQ5T0D9 272 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 GPRC6AQ5T6X5 926 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 LYPLAL1Q5VWZ2 237 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 PSAPL1Q6NUJ1 521 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 CERS6Q6ZMG9 384 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 MICALCLQ6ZW33 695 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 TRIM74Q86UV6 250 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 PALM2Q8IXS6 379 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 LMNTD2Q8IXW0 634 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 PIANPQ8IYJ0 282 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 GPR150Q8NGU9 434 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 GSDMBQ8TAX9 411 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 CERS2Q96G23 380 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 C9orf72Q96LT7 481 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 WDR92Q96MX6 357 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 FAM96AQ9H5X1 160 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 VPS18Q9P253 973 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 SLC6A14Q9UN76 642 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 ANKRD6Q9Y2G4 727 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 CACNA1EQ15878 2313 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 BPTFQ12830 3046 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 ADAMTS9Q9P2N4 1935 aa16.47■□□□□ 0.23
SUMO1-208ENST00000409627 PATE3B3GLJ2 98 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 TNFRSF10CO14798 259 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 CD3EAPO15446 510 aaKnown RBP16.46■□□□□ 0.23
SUMO1-208ENST00000409627 LRP3O75074 770 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 SPAG6O75602 509 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 PRSS56P0CW18 603 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 MYBL2P10244 700 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 CTSKP43235 329 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 CDKN1CP49918 316 aaPredicted RBP16.46■□□□□ 0.23
SUMO1-208ENST00000409627 VSNL1P62760 191 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 BNC1Q01954 994 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 FZD2Q14332 565 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 SLMAPQ14BN4 828 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 CCNI2Q6ZMN8 369 aaPredicted RBP16.46■□□□□ 0.23
SUMO1-208ENST00000409627 TAS2R42Q7RTR8 314 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 KCNMB4Q86W47 210 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 SERPINA9Q86WD7 417 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 SPATS2Q86XZ4 545 aaKnown RBP16.46■□□□□ 0.23
SUMO1-208ENST00000409627 OR56A4Q8NGH8 313 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 GDAP1Q8TB36 358 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 HEXDCQ8WVB3 486 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 SCG3Q8WXD2 468 aaKnown RBP16.46■□□□□ 0.23
SUMO1-208ENST00000409627 TTC25Q96NG3 672 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 TTC1Q99614 292 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 FAM167BQ9BTA0 163 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 ZDHHC5Q9C0B5 715 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 ERVMER34-1Q9H9K5 563 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 TRIM39Q9HCM9 518 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 C20orf96Q9NUD7 363 aaPredicted RBP16.46■□□□□ 0.23
SUMO1-208ENST00000409627 ZDHHC3Q9NYG2 299 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 NCDNQ9UBB6 729 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 SLC17A4Q9Y2C5 497 aa16.46■□□□□ 0.23
SUMO1-208ENST00000409627 OAS3Q9Y6K5 1087 aaKnown RBP16.46■□□□□ 0.23
SUMO1-208ENST00000409627 IGLV3-16A0A075B6K0 115 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 TMEM202A6NGA9 273 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 GPR89AB7ZAQ6 455 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 KHNYNO15037 678 aaKnown RBP16.45■□□□□ 0.22
SUMO1-208ENST00000409627 VEGFDO43915 354 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 TUBBP07437 444 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 GPR89BP0CG08 455 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 OGNP20774 298 aaKnown RBP16.45■□□□□ 0.22
SUMO1-208ENST00000409627 SSTR1P30872 391 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 PPARGP37231 505 aaPredicted RBP16.45■□□□□ 0.22
SUMO1-208ENST00000409627 GRIK2Q13002 908 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 THOC5Q13769 683 aaKnown RBP16.45■□□□□ 0.22
SUMO1-208ENST00000409627 SEMA3AQ14563 771 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 ITIH4Q14624 930 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 DBN1Q16643 649 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 KIF19Q2TAC6 998 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 KHDC1Q4VXA5 237 aaKnown RBP16.45■□□□□ 0.22
SUMO1-208ENST00000409627 MRNIPQ6NTE8 343 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 NEPROQ6NW34 567 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 ZNF449Q6P9G9 518 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 ENPP7Q6UWV6 458 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 ADGRG6Q86SQ4 1221 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 PARGQ86W56 976 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 GSPT2Q8IYD1 628 aaKnown RBP16.45■□□□□ 0.22
SUMO1-208ENST00000409627 GABPB2Q8TAK5 448 aaPredicted RBP16.45■□□□□ 0.22
SUMO1-208ENST00000409627 CALML6Q8TD86 181 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 COPS8Q99627 209 aa16.45■□□□□ 0.22
SUMO1-208ENST00000409627 NUSAP1Q9BXS6 441 aaKnown RBP16.45■□□□□ 0.22
SUMO1-208ENST00000409627 ZCCHC2Q9C0B9 1178 aaKnown RBP16.45■□□□□ 0.22
SUMO1-208ENST00000409627 CDC42EP4Q9H3Q1 356 aaKnown RBP16.45■□□□□ 0.22
SUMO1-208ENST00000409627 LRRC4CQ9HCJ2 640 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms