RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CENPTQ96BT3 561 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 CERS2Q96G23 380 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 SERAC1Q96JX3 654 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 FCRL3Q96P31 734 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 TTC1Q99614 292 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 TRIM56Q9BRZ2 755 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 RIOK2Q9BVS4 552 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 TXLNGYQ9BZA5 131 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 C20orf96Q9NUD7 363 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 CACNA1BQ00975 2339 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 PLXNB3Q9ULL4 1909 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 A0A1B0GVT2 93 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 CCDC162PA2VCL2 907 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 PRAMEF26H0Y7S4 382 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 CCL22O00626 93 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 FPGTO14772 594 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 VILLO15195 856 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 PFDN6O15212 129 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 GOT2P00505 430 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 SSTR1P30872 391 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 PPARGP37231 505 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 GPR1P46091 355 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 ARCN1P48444 511 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 GPX6P59796 221 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 XIAPP98170 497 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 BNC1Q01954 994 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 NFATC2Q13469 925 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 PEX6Q13608 980 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 WSCD2Q2TBF2 565 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 UAP1L1Q3KQV9 507 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 FASTKD1Q53R41 847 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 ZRANB3Q5FWF4 1079 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 RAET1GQ6H3X3 334 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 MRNIPQ6NTE8 343 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 CAPN12Q6ZSI9 719 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 RFLNAQ6ZTI6 216 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 KCNMB4Q86W47 210 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 TP53I13Q8NBR0 393 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 FAM174AQ8TBP5 190 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 ZNF398Q8TD17 642 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 CDKL2Q92772 493 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 SKA1Q96BD8 255 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 ULK4Q96C45 1275 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 SLC6A18Q96N87 628 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 FAM167BQ9BTA0 163 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 ASB8Q9H765 288 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 SUDS3Q9H7L9 328 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 PPANQ9NQ55 473 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 CATSPERZQ9NTU4 200 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 DNAAF2Q9NVR5 837 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 MOCS1Q9NZB8 636 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 ANKRD6Q9Y2G4 727 aa16.4■□□□□ 0.22
TSPAN4-208ENST00000409531 GAPDHSO14556 408 aaPredicted RBP16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 TOR1BO14657 336 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 ACSL3O95573 720 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 PCCBP05166 539 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 ARNTP27540 789 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 CD38P28907 300 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 IRF4Q15306 451 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 CHRNA6Q15825 494 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 KIF19Q2TAC6 998 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 LYPLAL1Q5VWZ2 237 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 NEPROQ6NW34 567 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 PNCKQ6P2M8 343 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 CERS6Q6ZMG9 384 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 PTAR1Q7Z6K3 402 aaPredicted RBP16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 SDCCAG8Q86SQ7 713 aaPredicted RBP16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 OTUD6BQ8N6M0 293 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 OR2I1PQ8NGU4 316 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 HNRNPLLQ8WVV9 542 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 UBLCP1Q8WVY7 318 aaPredicted RBP16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 SCG3Q8WXD2 468 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 CNTNAP3BQ96NU0 1288 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 VPS35Q96QK1 796 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 CNTNAP3Q9BZ76 1288 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 AASDHPPTQ9NRN7 309 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 SMOXQ9NWM0 555 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 NSMCE4AQ9NXX6 385 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 CRLS1Q9UJA2 301 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 HS3ST3A1Q9Y663 406 aa16.39■□□□□ 0.21
TSPAN4-208ENST00000409531 CNOT1A5YKK6 2376 aaKnown RBP16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 A0A087WUV0 522 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 UQCRHLA0A096LP55 91 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 A0A1W2PR77 199 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 TCRBV9S1A1TA0A576 114 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 AGAP14A8MT82 685 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 CD3EAPO15446 510 aaKnown RBP16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 RIPK2O43353 540 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 UQCRHP07919 91 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 ABHD2P08910 425 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 FOXN2P32314 431 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 MGAT5Q09328 741 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 SLC14A1Q13336 389 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 STAT4Q14765 748 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 HLA-BQ31612 363 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 ADAMTSL4Q6UY14 1074 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 MREGQ8N565 214 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 MFSD2AQ8NA29 543 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 GPR150Q8NGU9 434 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 TCF12Q99081 682 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms