RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 C9JVG2 144 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 LSM1O15116 133 aaKnown RBP15.37■□□□□ 0.05
LIMS2-205ENST00000409455 GMNNO75496 209 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 NCK1P16333 377 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 IMPDH1P20839 514 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 ARNTP27540 789 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 ALDH3A2P51648 485 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 ARSFP54793 590 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 POLD3Q15054 466 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-205ENST00000409455 TRIM71Q2Q1W2 868 aaKnown RBP15.37■□□□□ 0.05
LIMS2-205ENST00000409455 UGT3A2Q3SY77 523 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 COQ5Q5HYK3 327 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 INTS6LQ5JSJ4 861 aaKnown RBP15.37■□□□□ 0.05
LIMS2-205ENST00000409455 TMEM214Q6NUQ4 689 aaKnown RBP15.37■□□□□ 0.05
LIMS2-205ENST00000409455 ITIH5Q86UX2 942 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 PTRH1Q86Y79 214 aaKnown RBP15.37■□□□□ 0.05
LIMS2-205ENST00000409455 C8orf59Q8N0T1 100 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-205ENST00000409455 CLYBLQ8N0X4 340 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 SLC2A14Q8TDB8 520 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 NT5C3BQ969T7 300 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 TBL1YQ9BQ87 522 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 TRIM8Q9BZR9 551 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 MIOSQ9NXC5 875 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 ENPP5Q9UJA9 477 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 FBXO5Q9UKT4 447 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 BAG5Q9UL15 447 aa15.37■□□□□ 0.05
LIMS2-205ENST00000409455 MOXD2PA6NHM9 499 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 NR4A1P22736 598 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 LMO2P25791 158 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 TAF6P49848 677 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 TPD52P55327 224 aaPredicted RBP15.36■□□□□ 0.05
LIMS2-205ENST00000409455 LILRA4P59901 499 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 NFYCQ13952 458 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 ACAP2Q15057 778 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 NDUFA5Q16718 116 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 C6orf183Q5T699 404 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 NEPROQ6NW34 567 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 TBPL2Q6SJ96 375 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 LINC00299Q6ZSB3 139 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 PIWIL3Q7Z3Z3 882 aaKnown RBP15.36■□□□□ 0.05
LIMS2-205ENST00000409455 SLCO6A1Q86UG4 719 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 DCP1BQ8IZD4 617 aaKnown RBP15.36■□□□□ 0.05
LIMS2-205ENST00000409455 CLEC4FQ8N1N0 589 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 SLAIN1Q8ND83 568 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 DNAJB14Q8TBM8 379 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 TMEM125Q96AQ2 219 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 FKBP10Q96AY3 582 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 RPL10LQ96L21 214 aaKnown RBP15.36■□□□□ 0.05
LIMS2-205ENST00000409455 CHID1Q9BWS9 393 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 TPK1Q9H3S4 243 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 GDAP2Q9NXN4 497 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 ANKMY1Q9P2S6 941 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 ERVK-11Q9UQG0 969 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 V9GYQ6 96 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 RALGAPA2Q2PPJ7 1873 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 MATN4O95460 622 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 THRBP10828 461 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 TGM1P22735 817 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 ADRA1BP35368 520 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 SOX11P35716 441 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 PNPLA4P41247 253 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 AIF1P55008 147 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 LIPEQ05469 1076 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 DNASE1L3Q13609 305 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 INAQ16352 499 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 RBM20Q5T481 1227 aaKnown RBP15.36■□□□□ 0.05
LIMS2-205ENST00000409455 FAM219BQ5XKK7 198 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 AGMOQ6ZNB7 445 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 PLEKHG7Q6ZR37 379 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 OTOP3Q7RTS5 596 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 CYP2U1Q7Z449 544 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 HDAC2Q92769 488 aaKnown RBP15.36■□□□□ 0.05
LIMS2-205ENST00000409455 RNF145Q96MT1 663 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 PTCH2Q9Y6C5 1203 aa15.36■□□□□ 0.05
LIMS2-205ENST00000409455 ARL5CA6NH57 179 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 UGT2B11O75310 529 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 DEAF1O75398 565 aaPredicted RBP15.35■□□□□ 0.05
LIMS2-205ENST00000409455 MYO1DO94832 1006 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 HNRNPFP52597 415 aaKnown RBP15.35■□□□□ 0.05
LIMS2-205ENST00000409455 YBX1P67809 324 aaKnown RBP15.35■□□□□ 0.05
LIMS2-205ENST00000409455 MAPRE1Q15691 268 aaKnown RBP15.35■□□□□ 0.05
LIMS2-205ENST00000409455 PGS1Q32NB8 556 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 RABL3Q5HYI8 236 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 ZNF678Q5SXM1 525 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 SLC16A12Q6ZSM3 486 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 BNIPLQ7Z465 357 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 IPMKQ8NFU5 416 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 TSPAN17Q96FV3 270 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 VMP1Q96GC9 406 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 NSMCE3Q96MG7 304 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 ZNF560Q96MR9 790 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 CTRCQ99895 268 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 RMND5AQ9H871 391 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 SLC2A6Q9UGQ3 507 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 ATP11BQ9Y2G3 1177 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 PCDHGA11Q9Y5H2 935 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 DNAJC15Q9Y5T4 150 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 SNX5Q9Y5X3 404 aa15.35■□□□□ 0.05
LIMS2-205ENST00000409455 ZFC3H1O60293 1989 aaKnown RBP15.35■□□□□ 0.05
LIMS2-205ENST00000409455 A0A1W2PQ45 241 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms