RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 EID2Q8N6I1 236 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 PPHLN1Q8NEY8 458 aaKnown RBP20.11■□□□□ 0.81
PTCD3-202ENST00000409326 OR4C6Q8NH72 309 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 ZNF398Q8TD17 642 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 PEX13Q92968 403 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 CLPBQ9H078 707 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 TRIM39Q9HCM9 518 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 NLGN3Q9NZ94 848 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 CCDC78A2IDD5 438 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 GPR89AB7ZAQ6 455 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 LMO7DNF2Z398 122 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 CCL22O00626 93 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 FFAR2O15552 330 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 UGT1A9O60656 530 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 DNAJC6O75061 913 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 CELA2BP08218 269 aaPredicted RBP20.1■□□□□ 0.81
PTCD3-202ENST00000409326 GPR89BP0CG08 455 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 ALPPL2P10696 532 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 MLNP12872 115 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 CEACAM1P13688 526 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 UGT1A6P19224 532 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 UGT1A1P22309 533 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 UGT1A4P22310 534 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 IVDP26440 423 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 UGT1A3P35503 534 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 UGT1A5P35504 534 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 GNPDA1P46926 289 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 NFATC2Q13469 925 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 WHAMMP3Q1A5X7 153 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 PCID2Q5JVF3 399 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 TSTD2Q5T7W7 516 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 PCGF5Q86SE9 256 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 CAND1Q86VP6 1230 aaKnown RBP20.1■□□□□ 0.81
PTCD3-202ENST00000409326 SDR16C5Q8N3Y7 309 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 OR13J1Q8NGT2 312 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 CDKN2AIPNLQ96HQ2 116 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 TRIM51Q9BSJ1 452 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 DUSP23Q9BVJ7 150 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 TMEM168Q9H0V1 697 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 ASB8Q9H765 288 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 RMI1Q9H9A7 625 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 UGT1A7Q9HAW7 530 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 UGT1A10Q9HAW8 530 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 UGT1A8Q9HAW9 530 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 XAB2Q9HCS7 855 aaKnown RBP20.1■□□□□ 0.81
PTCD3-202ENST00000409326 ARFGAP3Q9NP61 516 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 TRNAU1APQ9NX07 287 aaKnown RBP20.1■□□□□ 0.81
PTCD3-202ENST00000409326 ATXN10Q9UBB4 475 aa20.1■□□□□ 0.81
PTCD3-202ENST00000409326 PIKFYVEQ9Y2I7 2098 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 AGAP14A8MT82 685 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 TPP1O14773 563 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 VEGFDO43915 354 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 NUAK1O60285 661 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 KCNK5O95279 499 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 ITGALP20701 1170 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 MGAT1P26572 445 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 MC4RP32245 332 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 CA5AP35218 305 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 NOVA1P51513 510 aaKnown RBP20.09■□□□□ 0.81
PTCD3-202ENST00000409326 CRADDP78560 199 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 ACVR1Q04771 509 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 KHDC1Q4VXA5 237 aaKnown RBP20.09■□□□□ 0.81
PTCD3-202ENST00000409326 PYCR3Q53H96 274 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 LDLRAP1Q5SW96 308 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 ZNF648Q5T619 568 aaPredicted RBP20.09■□□□□ 0.81
PTCD3-202ENST00000409326 IZUMO3Q5VZ72 239 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 ARMC3Q5W041 872 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 MARK2Q7KZI7 788 aaKnown RBP20.09■□□□□ 0.81
PTCD3-202ENST00000409326 SNX20Q7Z614 316 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 ADGRG6Q86SQ4 1221 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 HOOK3Q86VS8 718 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 GKN2Q86XP6 184 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 GALNT13Q8IUC8 556 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 DDHD1Q8NEL9 900 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 KIF18AQ8NI77 898 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 GDAP1Q8TB36 358 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 SERPINB12Q96P63 405 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 OR2M4Q96R27 311 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 CDC6Q99741 560 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 OR2AG1Q9H205 316 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 SUDS3Q9H7L9 328 aaPredicted RBP20.09■□□□□ 0.81
PTCD3-202ENST00000409326 SYBUQ9NX95 663 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 MRFAP1Q9Y605 127 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 SLC30A1Q9Y6M5 507 aa20.09■□□□□ 0.81
PTCD3-202ENST00000409326 GOLGA8MH3BSY2 632 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 TRIM38O00635 465 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 MTX2O75431 263 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 ANXA6P08133 673 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 ZNF8P17098 575 aaPredicted RBP20.08■□□□□ 0.81
PTCD3-202ENST00000409326 ARSDP51689 593 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 TUBB2AQ13885 445 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 TCEA2Q15560 299 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 DEFB133Q30KQ1 61 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 GPRC6AQ5T6X5 926 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 PSAPL1Q6NUJ1 521 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 LVRNQ6Q4G3 990 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 MAATS1Q7Z4T9 603 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 GPBAR1Q8TDU6 330 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 ULK4Q96C45 1275 aa20.08■□□□□ 0.81
PTCD3-202ENST00000409326 ZNF778Q96MU6 729 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms