RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 CLCN3P51790 818 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 PHC1P78364 1004 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 ERI1Q8IV48 349 aaKnown RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 ZNF34Q8IZ26 560 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 THRSPQ92748 146 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 LGR4Q9BXB1 951 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 SOHLH2Q9NX45 425 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 RP1P56715 2156 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 EFCAB9A8MZ26 197 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 C1QTNF3-AMACRE9PGA6 284 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 FFAR3O14843 346 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 GPR42O15529 346 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 PEX11AO75192 247 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 LINC00032P0C843 101 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 DUPD1Q68J44 220 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 FOXR1Q6PIV2 292 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 UBR7Q8N806 425 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 PMF1-BGLAPU3KQ54 211 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 ZBTB11O95625 1053 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 ZNF433Q8N7K0 673 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 NXPE2Q96DL1 559 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 KCNA5P22460 613 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 GNPDA1P46926 289 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 FAM13CQ8NE31 585 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 FBXO6Q9NRD1 293 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 POLR3HQ9Y535 204 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 ROBO3Q96MS0 1386 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CALCAP01258 141 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CDC25CP30307 473 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 AHSA2Q719I0 299 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 TIGD4Q8IY51 512 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 PNLDC1Q8NA58 520 aaKnown RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 SUSD6Q92537 303 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CNPPD1Q9BV87 410 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 ZDHHC6Q9H6R6 413 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 KAT8Q9H7Z6 458 aaKnown RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CXorf21Q9HAI6 301 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 ARHGEF28Q8N1W1 1705 aaKnown RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 OR7A10O76100 309 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 PRAMEF1O95521 474 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CHKAP35790 457 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CA9Q16790 459 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 PIGKQ92643 395 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 AIF1LQ9BQI0 150 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CHMP1AQ9HD42 196 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 TMEM5Q9Y2B1 443 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 LRRC10BA6NIK2 292 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 BPGMP07738 259 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 POU5F1Q01860 360 aaKnown RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 PLEKHG4Q58EX7 1191 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 MIIPQ5JXC2 388 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 BBS12Q6ZW61 710 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CXorf40BQ96DE9 158 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 SPACA7Q96KW9 195 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 TMEM134Q9H6X4 195 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 EXO5Q9H790 373 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 LRTM1Q9HBL6 345 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 EIF3KQ9UBQ5 218 aaKnown RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 MAU2Q9Y6X3 613 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 TRIP11Q15643 1979 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 IQSEC2Q5JU85 1478 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 E5RJQ4 531 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 TPSB2P20231 275 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 TPSAB1Q15661 275 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 GALNTL5Q7Z4T8 443 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CUZD1Q86UP6 607 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 RP1L1Q8IWN7 2480 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CEP41Q9BYV8 373 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 FABP12A6NFH5 140 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 HOXC12P31275 282 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 C6orf52Q5T4I8 152 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 FAM46CQ5VWP2 391 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 CEP76Q8TAP6 659 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 RHBDF1Q96CC6 855 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 ACAT2Q9BWD1 397 aa12.08□□□□□ -0.48
SHANK2-203ENST00000409161 SHOX2O60902 331 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 ASGR1P07306 291 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 TACSTD2P09758 323 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 SLC35G4P0C7Q5 338 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 CLUP10909 449 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 EPCAMP16422 314 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 WEE1P30291 646 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 GXYLT1Q4G148 440 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 TNS4Q8IZW8 715 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 HJURPQ8NCD3 748 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 LINGO1Q96FE5 620 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 DNAJC11Q9NVH1 559 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 CASTOR2A6NHX0 329 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 TNFRSF11BO00300 401 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 SP100P23497 879 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 ILF3Q12906 894 aaKnown RBP eCLIP12.07□□□□□ -0.485e-8■■■■□ 23.8
SHANK2-203ENST00000409161 ADAM15Q13444 863 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 GRIK4Q16099 956 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 CAPN13Q6MZZ7 669 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 PHF13Q86YI8 300 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 CMTR2Q8IYT2 770 aaKnown RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 GALNT15Q8N3T1 639 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms