RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 NFRKBQ6P4R8 1299 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 PLXDC2Q6UX71 529 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 GDPGP1Q6ZNW5 385 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 FRMD7Q6ZUT3 714 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 FBXO16Q8IX29 292 aaPredicted RBP-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 GPC2Q8N158 579 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 GLIS1Q8NBF1 620 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 SUSD6Q92537 303 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 RHNO1Q9BSD3 238 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 BACH2Q9BYV9 841 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 PLA2G2FQ9BZM2 168 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 Q9N2K0 584 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 CUTCQ9NTM9 273 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 GNL3LQ9NVN8 582 aaKnown RBP-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 ZNF629Q9UEG4 869 aaPredicted RBP-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 TBC1D29Q9UFV1 150 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 AMDHD2Q9Y303 409 aa-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 FLNAP21333 2647 aaKnown RBP-2.08□□□□□ -2.74
MIR548F3-201ENST00000408509 HYDINQ4G0P3 5121 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 IGLV4-69A0A075B6H9 119 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 CHL1O00533 1208 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 ZIC3O60481 467 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 S1PR1P21453 382 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 CCNE1P24864 410 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 SOX9P48436 509 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 MEOX2P50222 304 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 HERVK_113P61574 105 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 CYCSP99999 105 aaKnown RBP-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 SRSF2Q01130 221 aaKnown RBP-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 MALLQ13021 153 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 PDE7AQ13946 482 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 RPS6KA1Q15418 735 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 LTB4RQ15722 352 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 CNGA2Q16280 664 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 ARL13AQ5H913 290 aaPredicted RBP-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 OR7E24Q6IFN5 339 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 C19orf35Q6ZS72 473 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 ISCA2Q86U28 154 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 TGIF2LYQ8IUE0 185 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 CCDC105Q8IYK2 499 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 OR52P1PQ8NH57 321 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 FBXO30Q8TB52 745 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 TNPO1Q92973 898 aaKnown RBP-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 ANAPC16Q96DE5 110 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 PPP1R16AQ96I34 528 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 ADAD1Q96M93 576 aaKnown RBP-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 IPO9Q96P70 1041 aaKnown RBP-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 SEMA3CQ99985 751 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 DDX50Q9BQ39 737 aaKnown RBP-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 JPT2Q9H910 190 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 CERS4Q9HA82 394 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 ZBTB20Q9HC78 741 aaPredicted RBP-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 B4GALT6Q9UBX8 382 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 DNAJB4Q9UDY4 337 aa-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 DYNC1LI1Q9Y6G9 523 aaKnown RBP-2.09□□□□□ -2.74
MIR548F3-201ENST00000408509 KIAA1109Q2LD37 5005 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 A0A0A6YYC8 382 aaPredicted RBP-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 A0A1W2PNN7 141 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 CCDC189A1A4V9 331 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 I3L1I5 382 aaPredicted RBP-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 AGPSO00116 658 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 HAS3O00219 553 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 KIF3BO15066 747 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 SRGAP2O75044 1071 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 PRDM1O75626 825 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 CNTN5O94779 1100 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 MMP3P08254 477 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 MRPL3P09001 348 aaKnown RBP-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 TMEM225BP0DP42 221 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 LIFP15018 202 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 VIPR2P41587 438 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 ELK3P41970 407 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 NPBWR1P48145 328 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 GATMP50440 423 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 SUCLG1P53597 346 aaKnown RBP-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 WNT3P56703 355 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 LGALS3BPQ08380 585 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 PLA2G7Q13093 441 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 SLC39A6Q13433 755 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 IRF4Q15306 451 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 PRSS8Q16651 343 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 TCTN1Q2MV58 587 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 ITPRIPL2Q3MIP1 535 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 ABCA11PQ4W5N1 156 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 C5orf47Q569G3 176 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 ZNF789Q5FWF6 425 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 FAM120AOSQ5T036 256 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 SHEQ5VZ18 495 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 LEMD1Q68G75 181 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 SHFQ7M4L6 423 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 PHC2Q8IXK0 858 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 ZNF610Q8N9Z0 462 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 AUTS2Q8WXX7 1259 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 ATXN7L3BQ96GX2 97 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 RAX2Q96IS3 184 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 FAM20AQ96MK3 541 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 NUP88Q99567 741 aaPredicted RBP-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 CAPS2Q9BXY5 557 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 RAB33BQ9H082 229 aa-2.1□□□□□ -2.75
MIR548F3-201ENST00000408509 VEZTQ9HBM0 779 aa-2.1□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms