RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 UCNP55089 124 aa19.09■□□□□ 0.65
SMARCB1-204ENST00000407422 SFRP1Q8N474 314 aa19.09■□□□□ 0.65
SMARCB1-204ENST00000407422 MRFAP1L1Q96HT8 127 aa19.09■□□□□ 0.65
SMARCB1-204ENST00000407422 PANX2Q96RD6 677 aa19.09■□□□□ 0.65
SMARCB1-204ENST00000407422 CMKLR1Q99788 373 aa19.09■□□□□ 0.65
SMARCB1-204ENST00000407422 OR2AG1Q9H205 316 aa19.09■□□□□ 0.65
SMARCB1-204ENST00000407422 EPN1Q9Y6I3 576 aaPredicted RBP19.09■□□□□ 0.65
SMARCB1-204ENST00000407422 PIEZO2Q9H5I5 2752 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 IGHV1OR21-1A0A087WYE8 117 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 IGHV5-10-1A0A0J9YXX1 117 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 TEX51A0A1B0GUA7 166 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 GRID2O43424 1007 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 SLC25A14O95258 325 aaPredicted RBP19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 NDUFA10O95299 355 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 PRB1P04280 392 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 ZNF8P17098 575 aaPredicted RBP19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 MPSTP25325 297 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 CSF2RBP32927 897 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 WNT3AP56704 352 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 DCDC1P59894 354 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 CFHR1Q03591 330 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 ZNF569Q5MCW4 686 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 KDELC1Q6UW63 502 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 ZNF567Q8N184 647 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 TMEM159Q96B96 161 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 HERPUD2Q9BSE4 406 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 ZSCAN5AQ9BUG6 496 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 C10orf88Q9H8K7 445 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 RMI1Q9H9A7 625 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 BPIFA1Q9NP55 256 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 KCNK4Q9NYG8 393 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 KLHL8Q9P2G9 620 aaPredicted RBP19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 FAM153AQ9UHL3 310 aa19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 REXO2Q9Y3B8 237 aaKnown RBP19.08■□□□□ 0.65
SMARCB1-204ENST00000407422 GCN1Q92616 2671 aaKnown RBP19.08■□□□□ 0.64
SMARCB1-204ENST00000407422 PRAMEF33A0A0G2JMD5 474 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 LOC285095A0A1B0GVY8 99 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 ATXN7O15265 892 aaPredicted RBP19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 ZW10O43264 779 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 PRAMEF10O60809 474 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 CHRNA4P43681 627 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 FASLGP48023 281 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 MAPK10P53779 464 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 TGIF1Q15583 401 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 CCDC70Q6NSX1 233 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 PCSK4Q6UW60 755 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 TRAM1L1Q8N609 369 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 HTR3CQ8WXA8 447 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 OXNAD1Q96HP4 312 aaPredicted RBP19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 RBM41Q96IZ5 413 aaKnown RBP19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 CCDC74BQ96LY2 380 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 QKIQ96PU8 341 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 CARD9Q9H257 536 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 TRIM39Q9HCM9 518 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 LUC7LQ9NQ29 371 aaKnown RBP19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 WDR70Q9NW82 654 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 TMEM9Q9P0T7 183 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 NFKBIL1Q9UBC1 381 aaPredicted RBP19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 ADGRG1Q9Y653 693 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 A6NCN8 305 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 NVLO15381 856 aaKnown RBP19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 MTSS1O43312 755 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 SNX2O60749 519 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 MTX2O75431 263 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 CCL4P13236 92 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 FECHP22830 423 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 VAC14Q08AM6 782 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 SIRPB2Q5JXA9 342 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 IYDQ6PHW0 289 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 RAD9BQ6WBX8 426 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 BBS12Q6ZW61 710 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 PID1Q7Z2X4 250 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 ADGRG6Q86SQ4 1221 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 SLC39A7Q92504 469 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 USP7Q93009 1102 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 GLYATL1Q969I3 302 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 MRGPRX2Q96LB1 330 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 FOXJ2Q9P0K8 574 aa19.07■□□□□ 0.64
SMARCB1-204ENST00000407422 EIF4E1BA6NMX2 242 aaKnown RBP19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 C9orf172C9J069 976 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 LIMK2P53671 638 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 NFATC2Q13469 925 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 SQSTM1Q13501 440 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 PPP2R5EQ16537 467 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 CLPPQ16740 277 aaPredicted RBP19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 KHDC1Q4VXA5 237 aaKnown RBP19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 GAS2L3Q86XJ1 694 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 TMTC1Q8IUR5 882 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 SLC25A41Q8N5S1 370 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 FCRL5Q96RD9 977 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 SLC38A3Q99624 504 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 LACRTQ9GZZ8 138 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 RAD18Q9NS91 495 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 ACSL6Q9UKU0 697 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 TMPRSS11EQ9UL52 423 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 SDK2Q58EX2 2172 aa19.06■□□□□ 0.64
SMARCB1-204ENST00000407422 EFSO43281 561 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms