RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 FRMD1Q8N878 549 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 PLA2G15Q8NCC3 412 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 ACVR1CQ8NER5 493 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 VPS35Q96QK1 796 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 TTC1Q99614 292 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 GPR22Q99680 433 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 BOCQ9BWV1 1114 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 WSB2Q9NYS7 404 aaPredicted RBP20.31■□□□□ 0.84
CHKB-201ENST00000406938 MTO1Q9Y2Z2 717 aaKnown RBP20.31■□□□□ 0.84
CHKB-201ENST00000406938 NCOR1O75376 2440 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 PCCBP05166 539 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 PPARGP37231 505 aaPredicted RBP20.3■□□□□ 0.84
CHKB-201ENST00000406938 GPR1P46091 355 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 LRRC14Q15048 493 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 IRF4Q15306 451 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 HSP90B2PQ58FF3 399 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 TNFAIP8L3Q5GJ75 292 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 GPRC6AQ5T6X5 926 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 NLRP8Q86W28 1048 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 DCLK2Q8N568 766 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 GPATCH11Q8N954 259 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 TP53I13Q8NBR0 393 aaPredicted RBP20.3■□□□□ 0.84
CHKB-201ENST00000406938 GLYATL1Q969I3 302 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 MTBPQ96DY7 904 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 PKNOX2Q96KN3 472 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 NDNQ99608 321 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 MED4Q9NPJ6 270 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 A0A0C4DFX4 3053 aa20.3■□□□□ 0.84
CHKB-201ENST00000406938 FAM95CA0A1B0GW59 222 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 C10orf142B7Z368 130 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 H3BQF6 201 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 INPP4BO15327 924 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 ATP5DP30049 168 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 PTGER3P43115 390 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 RBM20Q5T481 1227 aaKnown RBP20.29■□□□□ 0.84
CHKB-201ENST00000406938 KCTD16Q68DU8 428 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 RBFAQ8N0V3 343 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 DDHD1Q8NEL9 900 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 GDAP1Q8TB36 358 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 BTN2A2Q8WVV5 523 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 ATP6V1G3Q96LB4 118 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 COPS8Q99627 209 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 C1QTNF7Q9BXJ2 289 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 STMN4Q9H169 189 aaPredicted RBP20.29■□□□□ 0.84
CHKB-201ENST00000406938 C6orf106Q9H6K1 298 aaPredicted RBP20.29■□□□□ 0.84
CHKB-201ENST00000406938 MBNL1Q9NR56 388 aaKnown RBP20.29■□□□□ 0.84
CHKB-201ENST00000406938 ZDHHC3Q9NYG2 299 aa20.29■□□□□ 0.84
CHKB-201ENST00000406938 TRPM6Q9BX84 2022 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 AXIN1O15169 862 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 RAD51BO15315 384 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 ALDOAP04075 364 aaKnown RBP20.28■□□□□ 0.84
CHKB-201ENST00000406938 ITIH4Q14624 930 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 AGBL2Q5U5Z8 902 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 PNCKQ6P2M8 343 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 ZNF549Q6P9A3 640 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 TRABD2AQ86V40 505 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 PHYKPLQ8IUZ5 450 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 TLCD1Q96CP7 247 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 ELMO2Q96JJ3 720 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 BIRC8Q96P09 236 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 KLF6Q99612 283 aaPredicted RBP20.28■□□□□ 0.84
CHKB-201ENST00000406938 GPR174Q9BXC1 333 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 P2RY12Q9H244 342 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 CAB39LQ9H9S4 337 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 FZD3Q9NPG1 666 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 PRMT8Q9NR22 394 aaPredicted RBP20.28■□□□□ 0.84
CHKB-201ENST00000406938 SLC39A10Q9ULF5 831 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 CORO1CQ9ULV4 474 aaPredicted RBP20.28■□□□□ 0.84
CHKB-201ENST00000406938 NOVA2Q9UNW9 492 aaKnown RBP20.28■□□□□ 0.84
CHKB-201ENST00000406938 PLXNB3Q9ULL4 1909 aa20.28■□□□□ 0.84
CHKB-201ENST00000406938 IGLV3-16A0A075B6K0 115 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 A0A1W2PPM1 405 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 PRMT5O14744 637 aaPredicted RBP20.27■□□□□ 0.84
CHKB-201ENST00000406938 SLC31A1O15431 190 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 LATO43561 262 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 MTX2O75431 263 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 ZNF7P17097 686 aaPredicted RBP20.27■□□□□ 0.84
CHKB-201ENST00000406938 FMO4P31512 558 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 AKT1P31749 480 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 ADARP55265 1226 aaKnown RBP20.27■□□□□ 0.84
CHKB-201ENST00000406938 B4GALNT1Q00973 533 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 DMWDQ09019 674 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 KDM7AQ6ZMT4 941 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 SRRM1Q8IYB3 904 aaKnown RBP20.27■□□□□ 0.84
CHKB-201ENST00000406938 NAT14Q8WUY8 206 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 ASB12Q8WXK4 309 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 CENPTQ96BT3 561 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 SERAC1Q96JX3 654 aa20.27■□□□□ 0.84
CHKB-201ENST00000406938 LENG8Q96PV6 779 aaPredicted RBP20.27■□□□□ 0.84
CHKB-201ENST00000406938 CNOT6Q9ULM6 557 aaKnown RBP20.27■□□□□ 0.84
CHKB-201ENST00000406938 TPP1O14773 563 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 SLC25A14O95258 325 aaPredicted RBP20.27■□□□□ 0.83
CHKB-201ENST00000406938 PYGLP06737 847 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 SAT1P21673 171 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 IGFALSP35858 605 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 ILF2Q12905 390 aaKnown RBP20.27■□□□□ 0.83
CHKB-201ENST00000406938 KHDC1Q4VXA5 237 aaKnown RBP20.27■□□□□ 0.83
CHKB-201ENST00000406938 CTSL3PQ5NE16 218 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 LDLRAP1Q5SW96 308 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 KIAA0895LQ68EN5 471 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms