RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ULK2Q8IYT8 1036 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 EEF1AKMT1Q8WVE0 214 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 ZDHHC6Q9H6R6 413 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 MEAF6Q9HAF1 191 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 IL26Q9NPH9 171 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 DPP7Q9UHL4 492 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 IKZF3Q9UKT9 509 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 RGSL1A5PLK6 1076 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 GAPDHSO14556 408 aaPredicted RBP24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 PER2O15055 1255 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 SIX3O95343 332 aaPredicted RBP24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 BPIP17213 487 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 CCNHP51946 323 aaPredicted RBP24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 ZRSR2Q15696 482 aaKnown RBP24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 C6orf163Q5TEZ5 329 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 PTRHD1Q6GMV3 140 aaKnown RBP24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 GRIN3AQ8TCU5 1115 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 ACTRT2Q8TDY3 377 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 ING5Q8WYH8 240 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 OTUB2Q96DC9 234 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 RTKNQ9BST9 563 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 ZNF385DQ9H6B1 395 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 ZDHHC7Q9NXF8 308 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 SLCO3A1Q9UIG8 710 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 WNT6Q9Y6F9 365 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 GLYATL1P3A0A0U1RQE8 302 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 CCDC189A1A4V9 331 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 ARHGEF15O94989 841 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 SPAM1P38567 509 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 CDH13P55290 713 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 NFATC2Q13469 925 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 CRTC1Q6UUV9 634 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 TPRG1Q6ZUI0 275 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 USP45Q70EL2 814 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 RBFAQ8N0V3 343 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 CBARPQ8N350 705 aaPredicted RBP24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 GIMAP7Q8NHV1 300 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 FUBP1Q96AE4 644 aaKnown RBP24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 CLPTM1LQ96KA5 538 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 LYSMD1Q96S90 227 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 DCLRE1BQ9H816 532 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 NOP53Q9NZM5 478 aaKnown RBP24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 NKX1-2Q9UD57 310 aaPredicted RBP24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 DHRS7Q9Y394 339 aa24.47■■□□□ 1.51
DNMT3A-206ENST00000406659 NOTCH4Q99466 2003 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 NPIPB15A6NHN6 443 aaPredicted RBP24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 LRRC14BA6NHZ5 514 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 IQCF5A8MTL0 148 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 TSPAN12O95859 305 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 CEBPBP17676 345 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 EEF1DP29692 281 aaKnown RBP24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 KHDC1Q4VXA5 237 aaKnown RBP24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 DPY19L3Q6ZPD9 716 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 NET1Q7Z628 596 aaPredicted RBP24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 TSPAN33Q86UF1 283 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 CPNE9Q8IYJ1 553 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 ADGRG2Q8IZP9 1017 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 CLYBLQ8N0X4 340 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 WDR60Q8WVS4 1066 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 ECHDC3Q96DC8 303 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 ASIC4Q96FT7 647 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 SCRN2Q96FV2 425 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 MARK4Q96L34 752 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 ZNF641Q96N77 438 aaPredicted RBP24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 CRLS1Q9UJA2 301 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 TMCO1Q9UM00 188 aa24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 MRPS23Q9Y3D9 190 aaKnown RBP24.46■■□□□ 1.51
DNMT3A-206ENST00000406659 SLC9A3R1O14745 358 aaPredicted RBP24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 TCF3P15923 654 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 RPS3P23396 243 aaKnown RBP eCLIP24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 CLCN7P51798 805 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 PTPN5P54829 565 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 INHBCP55103 352 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 CHRNA6Q15825 494 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 CLEC6AQ6EIG7 209 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 SNX32Q86XE0 403 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 GPSM1Q86YR5 675 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 RP9Q8TA86 221 aaKnown RBP24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 GNPTGQ9UJJ9 305 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 PPIL1Q9Y3C6 166 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 HCFC2Q9Y5Z7 792 aa24.45■■□□□ 1.5
DNMT3A-206ENST00000406659 TRBV5-4A0A0C4DH59 114 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 UGT1A6P19224 532 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 POLR2EP19388 210 aaKnown RBP24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 UGT1A1P22309 533 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 UGT1A4P22310 534 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 UGT1A3P35503 534 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 UGT1A5P35504 534 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 C1QTNF8P60827 252 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 CYLC2Q14093 348 aaPredicted RBP24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 CBX2Q14781 532 aaPredicted RBP24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 GPR33Q49SQ1 333 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 PDE12Q6L8Q7 609 aaKnown RBP24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 Q6ZVU0 165 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 ADIPOR2Q86V24 386 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 NAT16Q8N8M0 369 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 ENDOVQ8N8Q3 282 aaKnown RBP24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 VOPP1Q96AW1 172 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 LBHD1Q9BQE6 289 aaPredicted RBP24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 SLC2A11Q9BYW1 496 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms