RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 DNAJC18Q9H819 358 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 GRPEL1Q9HAV7 217 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 NRIP3Q9NQ35 241 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 PIH1D3Q9NQM4 214 aaKnown RBP4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 MRGBPQ9NV56 204 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 GDE1Q9NZC3 331 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 C5AR2Q9P296 337 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 DBNLQ9UJU6 430 aaKnown RBP4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 RCOR1Q9UKL0 485 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 CCDC144AA2RUR9 1427 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 ERBINQ96RT1 1412 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 ROCK2O75116 1388 aaKnown RBP4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 DUOX2Q9NRD8 1548 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 RALGAPBQ86X10 1494 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 A0A1W2PR77 199 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 CPED1A4D0V7 1026 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 KDM4EB2RXH2 506 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 E5RJQ4 531 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 MS4A18H0YCH9 400 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 H0YIN7 160 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 FTCDO95954 541 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 ARHGAP25P42331 645 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 PTH2RP49190 550 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZP1P60852 638 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 TGFB2P61812 414 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 ECT2LQ008S8 904 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 MAD2L1Q13257 205 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 IL11RAQ14626 422 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 C2orf68Q2NKX9 166 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 ARMC4Q5T2S8 1044 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 SLC18B1Q6NT16 456 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 PCSK4Q6UW60 755 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 CLEC17AQ6ZS10 378 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 SLC16A12Q6ZSM3 486 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 DENND5BQ6ZUT9 1274 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 RD3Q7Z3Z2 195 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 SDCCAG8Q86SQ7 713 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 GPSM1Q86YR5 675 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 Q8N1X5 172 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 TC2NQ8N9U0 490 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 OR1J2Q8NGS2 313 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 DEPDC1BQ8WUY9 529 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 ADAMTS14Q8WXS8 1223 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 TRIB2Q92519 343 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 ERGIC1Q969X5 290 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 FAM162AQ96A26 154 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 ARSGQ96EG1 525 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 SLC25A23Q9BV35 468 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 PRSS22Q9GZN4 317 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 PPP1R3EQ9H7J1 279 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 KRCC1Q9NPI7 259 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 TMEM184CQ9NVA4 438 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 TMEM51Q9NW97 253 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 PAG1Q9NWQ8 432 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 MTMR10Q9NXD2 777 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 STK39Q9UEW8 545 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 TUBE1Q9UJT0 475 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 GTF3C4Q9UKN8 822 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 WBP11Q9Y2W2 641 aaKnown RBP4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 DHX29Q7Z478 1369 aaKnown RBP4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 ARAP3Q8WWN8 1544 aa4.77□□□□□ -1.65
HMGB3P18-201ENST00000406327 ATP10AO60312 1499 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 WDR7Q9Y4E6 1490 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 MAGEB17A8MXT2 336 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 PSMD10O75832 226 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 NUDT3O95989 172 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 FDPSP14324 419 aaKnown RBP4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 PRLRP16471 622 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 IFNAR1P17181 557 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 GNLYP22749 145 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 ACVRL1P37023 503 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 GP5P40197 560 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 FASLGP48023 281 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 MMP14P50281 582 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 MTX1Q13505 466 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 CAMK2DQ13557 499 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 TNIP1Q15025 636 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 SNAPC1Q16533 368 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 LETM2Q2VYF4 491 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 MMEL1Q495T6 779 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 CBWD6Q4V339 395 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 CBWD3Q5JTY5 395 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 DCST1Q5T197 706 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 ASPHD1Q5U4P2 390 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 FRG2Q64ET8 278 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 KCTD18Q6PI47 426 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 RBPMS2Q6ZRY4 209 aaKnown RBP4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 ERN2Q76MJ5 926 aaKnown RBP4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 SHFQ7M4L6 423 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 HAUS6Q7Z4H7 955 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 CAMKMTQ7Z624 323 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 CCDC190Q86UF4 302 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 PRAG1Q86YV5 1406 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 OR8H3Q8N146 312 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 XXYLT1Q8NBI6 393 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 OR10S1Q8NGN2 331 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 KIF18AQ8NI77 898 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 SETD6Q8TBK2 473 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 SIPA1Q96FS4 1042 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 PPP1R13BQ96KQ4 1090 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms