RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 FUBP1Q96AE4 644 aaKnown RBP13.96□□□□□ -0.17
PRAME-205ENST00000405655 LINGO1Q96FE5 620 aa13.96□□□□□ -0.17
PRAME-205ENST00000405655 CCDC68Q9H2F9 335 aa13.96□□□□□ -0.17
PRAME-205ENST00000405655 DENND2DQ9H6A0 471 aaPredicted RBP13.96□□□□□ -0.17
PRAME-205ENST00000405655 TCF7L2Q9NQB0 619 aa13.96□□□□□ -0.17
PRAME-205ENST00000405655 INTS10Q9NVR2 710 aaKnown RBP13.96□□□□□ -0.17
PRAME-205ENST00000405655 LNPEPQ9UIQ6 1025 aa13.96□□□□□ -0.17
PRAME-205ENST00000405655 ERVW-1Q9UQF0 538 aa13.96□□□□□ -0.17
PRAME-205ENST00000405655 SLC30A1Q9Y6M5 507 aa13.96□□□□□ -0.17
PRAME-205ENST00000405655 WASH3PC4AMC7 463 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 PSMA3P25788 255 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 SERPINA4P29622 427 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 SNRPD1P62314 119 aaKnown RBP13.96□□□□□ -0.18
PRAME-205ENST00000405655 SH3BP2P78314 561 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 BTKQ06187 659 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 KRT72Q14CN4 511 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 E2F5Q15329 346 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 UGT3A1Q6NUS8 523 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 CYHR1Q6ZMK1 362 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 GET4Q7L5D6 327 aaPredicted RBP13.96□□□□□ -0.18
PRAME-205ENST00000405655 DET1Q7L5Y6 550 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 CUZD1Q86UP6 607 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 SCAMP4Q969E2 229 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 C3orf30Q96M34 536 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 P2RY12Q9H244 342 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 DUS2Q9NX74 493 aaKnown RBP13.96□□□□□ -0.18
PRAME-205ENST00000405655 TAS2R13Q9NYV9 303 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 B4GALT6Q9UBX8 382 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 SLC25A13Q9UJS0 675 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 TMPRSS11EQ9UL52 423 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 ITM2BQ9Y287 266 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 LRRK1Q38SD2 2015 aa13.96□□□□□ -0.18
PRAME-205ENST00000405655 CAPN8A6NHC0 703 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 PRRT4C9JH25 899 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 HDAC3O15379 428 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 LEFTY1O75610 366 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 TRIM16O95361 564 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 RBP1P09455 135 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 C1SP09871 688 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 CALB2P22676 271 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 CLCN7P51798 805 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 CACNG1Q06432 222 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 LAMB3Q13751 1172 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 LMNTD2Q8IXW0 634 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 GABPB2Q8TAK5 448 aaPredicted RBP13.95□□□□□ -0.18
PRAME-205ENST00000405655 TRPC4APQ8TEL6 797 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 INPP5DQ92835 1189 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 ZNF106Q9H2Y7 1883 aaKnown RBP13.95□□□□□ -0.18
PRAME-205ENST00000405655 BRD9Q9H8M2 597 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 FBRSL1Q9HCM7 1045 aaKnown RBP13.95□□□□□ -0.18
PRAME-205ENST00000405655 SEMA4BQ9NPR2 832 aaPredicted RBP13.95□□□□□ -0.18
PRAME-205ENST00000405655 OAS3Q9Y6K5 1087 aaKnown RBP13.95□□□□□ -0.18
PRAME-205ENST00000405655 H0Y3Z8 333 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 SDHDO14521 159 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 CCDC22O60826 627 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 GFAPP14136 432 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 IMPDH1P20839 514 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 TTPAP49638 278 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 UBE3AQ05086 875 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 PRKAA1Q13131 559 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 NFATC2Q13469 925 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 ATP13A5Q4VNC0 1218 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 SCIMPQ6UWF3 145 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 FRMD7Q6ZUT3 714 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 FRS2Q8WU20 508 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 SREK1Q8WXA9 508 aaKnown RBP13.95□□□□□ -0.18
PRAME-205ENST00000405655 LENG8Q96PV6 779 aaPredicted RBP13.95□□□□□ -0.18
PRAME-205ENST00000405655 PLEKHG4BQ96PX9 1271 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 FAM8A1Q9UBU6 413 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 TAGLN3Q9UI15 199 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 MID2Q9UJV3 735 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 SARDHQ9UL12 918 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 RNF112Q9ULX5 631 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 PLA2G4CQ9UP65 541 aa13.95□□□□□ -0.18
PRAME-205ENST00000405655 GLYATL1P3A0A0U1RQE8 302 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.94□□□□□ -0.18
PRAME-205ENST00000405655 E5RI56 91 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 ATP5HO75947 161 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 POLR2EP19388 210 aaKnown RBP13.94□□□□□ -0.18
PRAME-205ENST00000405655 EEF1DP29692 281 aaKnown RBP13.94□□□□□ -0.18
PRAME-205ENST00000405655 DNAJB13P59910 316 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 MXRA7P84157 204 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 NPAS3Q8IXF0 933 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 FGF13Q92913 245 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 CDK15Q96Q40 435 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 TRMT6Q9UJA5 497 aaKnown RBP13.94□□□□□ -0.18
PRAME-205ENST00000405655 ADAMTS6Q9UKP5 1117 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 BTRCQ9Y297 605 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 WASF2Q9Y6W5 498 aa13.94□□□□□ -0.18
PRAME-205ENST00000405655 H7C0S8 307 aa13.93□□□□□ -0.18
PRAME-205ENST00000405655 NPHS1O60500 1241 aa13.93□□□□□ -0.18
PRAME-205ENST00000405655 H2AFYO75367 372 aaKnown RBP13.93□□□□□ -0.18
PRAME-205ENST00000405655 HNRNPA1P09651 372 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRAME-205ENST00000405655 CISD3P0C7P0 127 aa13.93□□□□□ -0.18
PRAME-205ENST00000405655 CPOXP36551 454 aa13.93□□□□□ -0.18
PRAME-205ENST00000405655 NME5P56597 212 aa13.93□□□□□ -0.18
PRAME-205ENST00000405655 ERVK-21P61565 698 aa13.93□□□□□ -0.18
PRAME-205ENST00000405655 B4GALNT1Q00973 533 aa13.93□□□□□ -0.18
PRAME-205ENST00000405655 RAD51Q06609 339 aa13.93□□□□□ -0.18
PRAME-205ENST00000405655 KLF10Q13118 480 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms