RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 OR10A4Q9H209 315 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 PPIL3Q9H2H8 161 aaKnown RBP3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 OSGEPL1Q9H4B0 414 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 MRGBPQ9NV56 204 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 RNF7Q9UBF6 113 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 MORF4L1Q9UBU8 362 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 CFDP1Q9UEE9 299 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 TSPYL4Q9UJ04 414 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 HACL1Q9UJ83 578 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 KANSL1LA0AUZ9 987 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 OR6C75A6NL08 312 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 H7C0S8 307 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 TMEM189-UBE2V1I3L0A0 370 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 SMAD9O15198 467 aaKnown RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 SPRY1O43609 319 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 SLCO2B1O94956 709 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 CRYABP02511 175 aaKnown RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 ABCB1P08183 1280 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 ACTN1P12814 892 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 GLULP15104 373 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 PRLRP16471 622 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 CPT2P23786 658 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 HRH2P25021 359 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 ARRB2P32121 409 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 MC5RP33032 325 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 PLCD1P51178 756 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 CDH13P55290 713 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 BRWD1-AS2P59051 145 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 TAS2R38P59533 333 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 CD81P60033 236 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 CXCL9Q07325 125 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 FOXM1Q08050 763 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 GRIK2Q13002 908 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 MAD2L1Q13257 205 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 UBE2V1Q13404 147 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 CAMK2DQ13557 499 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 AMZ1Q400G9 498 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 FAM98BQ52LJ0 330 aaKnown RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 DCST1Q5T197 706 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 C6orf163Q5TEZ5 329 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 FAM69BQ5VUD6 431 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 TMEM211Q6ICI0 200 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 RGMBQ6NW40 437 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 KCTD18Q6PI47 426 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 DLK2Q6UY11 383 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 RAD9BQ6WBX8 426 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 ATG9AQ7Z3C6 839 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZNF34Q8IZ26 560 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 FAM9BQ8IZU0 186 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 PGBD5Q8N414 524 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 FBXO39Q8N4B4 442 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 POMGNT2Q8NAT1 580 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 SMRP1Q8NCR6 262 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 RBM15BQ8NDT2 890 aaKnown RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 OR14A16Q8NHC5 309 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 PTPMT1Q8WUK0 201 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 TEKT4Q8WW24 435 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZNF622Q969S3 477 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 LINC00615Q96LM1 132 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 BAG1Q99933 345 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 C1QTNF1Q9BXJ1 281 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 ST6GALNAC4Q9H4F1 302 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 RAD21L1Q9H4I0 556 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 C17orf75Q9HAS0 396 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 IL36RNQ9UBH0 155 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 DNAJB4Q9UDY4 337 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZHX1Q9UKY1 873 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 ACSL5Q9ULC5 683 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 KCNS2Q9ULS6 477 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 EXO1Q9UQ84 846 aaKnown RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 KLHL20Q9Y2M5 609 aa3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.86□□□□□ -1.79
HMGB1P17-201ENST00000403495 GPR75-ASB3A0A0A6YYF3 556 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 TMEM8BA6NDV4 472 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 MAP2K7O14733 419 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 CLGNO14967 610 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 SPINT2O43291 252 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 TBX10O75333 385 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZNF217O75362 1048 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 DAB1O75553 588 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 SERPINI2O75830 405 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 GGPS1O95749 300 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 TOMM40O96008 361 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 AFPP02771 609 aaKnown RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 CLDN20P56880 219 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 ROR2Q01974 943 aaKnown RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 KRT33BQ14525 404 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 CCDC142Q17RM4 750 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 SETMARQ53H47 684 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 XKR9Q5GH70 373 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 PPP6R3Q5H9R7 873 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 KRT79Q5XKE5 535 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 ALS2CLQ60I27 953 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZNF549Q6P9A3 640 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 KRT74Q7RTS7 529 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 LDB1Q86U70 411 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 ADIPOR2Q86V24 386 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 CHERPQ8IWX8 916 aaKnown RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 PELI3Q8N2H9 469 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 MCUQ8NE86 351 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms