RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PTCD2Q8WV60 388 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 BTN2A3PQ96KV6 586 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 SLC30A3Q99726 388 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 DGCR6LQ9BY27 220 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 MFSD1Q9H3U5 465 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 PTTG2Q9NZH5 202 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 MAP10Q9P2G4 905 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 ATXN10Q9UBB4 475 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 LIMD1Q9UGP4 676 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 SLC22A3O75751 556 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 MAP4P27816 1152 aaKnown RBP12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 INHBEP58166 350 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 DNAJB13P59910 316 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 PIGFQ07326 219 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 ATXN7L2Q5T6C5 722 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 MSANTD2Q6P1R3 559 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 FAM151BQ6UXP7 276 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 SDCCAG3Q96C92 435 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 NSMCE2Q96MF7 247 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 ABT1Q9ULW3 272 aaKnown RBP12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 TLR6Q9Y2C9 796 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 ZNF189O75820 626 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 SNAP29O95721 258 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 CYBBP04839 570 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 TACR2P21452 398 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 GKP32189 559 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 HK2P52789 917 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 ZNF177Q13360 481 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 XKR5Q6UX68 686 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 PIANPQ8IYJ0 282 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 TRPV1Q8NER1 839 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 ANAPC2Q9UJX6 822 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 DOLKQ9UPQ8 538 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 POLR3HQ9Y535 204 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 NOBOXO60393 691 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 DUSP11O75319 330 aaKnown RBP12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 CAPN1P07384 714 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 HOXD8P13378 290 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 IL2P60568 153 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 HMGCS1Q01581 520 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 TRAF2Q12933 501 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 LCP2Q13094 533 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 GRM2Q14416 872 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 PSAPL1Q6NUJ1 521 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 CNTN4Q8IWV2 1026 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 BPIFB6Q8NFQ5 453 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 FAM81AQ8TBF8 368 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 SUSD3Q96L08 255 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 RANBP9Q96S59 729 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 GPR62Q9BZJ7 368 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 TUBB1Q9H4B7 451 aa12.58□□□□□ -0.4
PPP4R1-202ENST00000400555 ALPIP09923 528 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 GPX3P22352 226 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 HSPA7P48741 367 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 LSM3P62310 102 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 RPL38P63173 70 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 C16orf87Q6PH81 154 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 LIMS2Q7Z4I7 341 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 UBXN10Q96LJ8 280 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 PKD2L2Q9NZM6 624 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 KLQ9UEF7 1012 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 VPS28Q9UK41 221 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 IKZF3Q9UKT9 509 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 EFNA1P20827 205 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 ATP1A4Q13733 1029 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 LAPTM4AQ15012 233 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 ARMC12Q5T9G4 340 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 RNF219Q5W0B1 726 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 GLYATQ6IB77 296 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 GPRIN3Q6ZVF9 776 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 SYVN1Q86TM6 617 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 ANKRD46Q86W74 232 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 PELI3Q8N2H9 469 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 ARRDC2Q8TBH0 407 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 BRSK1Q8TDC3 778 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 ASB1Q9Y576 335 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 LRATO95237 230 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 GJB5O95377 273 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 FGF1P05230 155 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 CDH2P19022 906 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 UGT1A1P22309 533 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 UGT1A4P22310 534 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 SLC6A2P23975 617 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 CCND3P30281 292 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 UGT1A3P35503 534 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 UGT1A5P35504 534 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 ENTPD1P49961 510 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 HTR6P50406 440 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 POLR2JP52435 117 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 PHEXP78562 749 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 DCTN2Q13561 401 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 DDX39BQ13838 428 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 ARHGEF7Q14155 803 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 LRRC73Q5JTD7 316 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 TMEM26Q6ZUK4 368 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 PPP1R2P1Q96PQ5 205 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 ZBED2Q9BTP6 218 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 TRMOQ9BU70 441 aa12.57□□□□□ -0.4
PPP4R1-202ENST00000400555 CHID1Q9BWS9 393 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms