RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SNTA1Q13424 505 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 TUSC3Q13454 348 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 OASLQ15646 514 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 LSM12Q3MHD2 195 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 FAM126BQ8IXS8 530 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 DPF1Q92782 380 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 WNT8BQ93098 351 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 NSL1Q96IY1 281 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 MRM3Q9HC36 420 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 B3GALT2O43825 422 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 USP12O75317 370 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 ARFIP1P53367 373 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF844Q08AG5 666 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 GTF2IRD2BQ6EKJ0 949 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 GTF2IRD2Q86UP8 949 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 PLCZ1Q86YW0 608 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 TSEN15Q8WW01 171 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 METTL7AQ9H8H3 244 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 DDX18Q9NVP1 670 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF226Q9NYT6 803 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 WRBO00258 174 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 KLHL41O60662 606 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 OR5F1O95221 314 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 RLN1P04808 185 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 GNALP38405 381 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 DNASE1L3Q13609 305 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 PDGFRLQ15198 375 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 PDPK2PQ6A1A2 396 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 CAPN13Q6MZZ7 669 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 BEND4Q6ZU67 534 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC41A1Q8IVJ1 513 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 SPERTQ8NA61 448 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC38A2Q96QD8 506 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC2A4RGQ9NR83 387 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 ACTL7BQ9Y614 415 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 KCNE2Q9Y6J6 123 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 A0A087X1B8 175 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 UBDO15205 165 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 SHMT1P34896 483 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 COPAP53621 1224 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 MGAT5Q09328 741 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 OVGP1Q12889 678 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 PFKFB4Q16877 469 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 ZCCHC12Q6PEW1 402 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 APTXQ7Z2E3 356 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 PLA2G15Q8NCC3 412 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 BRSK1Q8TDC3 778 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 COPS8Q99627 209 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 DGCR6LQ9BY27 220 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 FBXO6Q9NRD1 293 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 TNPO3Q9Y5L0 923 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 ARVCFO00192 962 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 LRATO95237 230 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 CYP3A4P08684 503 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 PAEPP09466 180 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 CHAF1BQ13112 559 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 SP140Q13342 867 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC30A6Q6NXT4 461 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 MMAAQ8IVH4 418 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 ZFPM1Q8IX07 1006 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 HPS1Q92902 700 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 TLR10Q9BXR5 811 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 C19orf25Q9UFG5 118 aaPredicted RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 A6NL46 340 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 RPL3P39023 403 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 ALDH3A2P51648 485 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 CSTF1Q05048 431 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 BATFQ16520 125 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 OTUD3Q5T2D3 398 aaPredicted RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 MOXD1Q6UVY6 613 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 NELL1Q92832 810 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 IRF7Q92985 503 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 KAZALD1Q96I82 304 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 NXF3Q9H4D5 531 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 BRF2Q9HAW0 419 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 HMG20AQ9NP66 347 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 SSX5O60225 188 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 IFNGP01579 166 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 GZMAP12544 262 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 UQCRC1P31930 480 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 MAGEA12P43365 314 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 HTRA3P83110 453 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 SAMD4BQ5PRF9 694 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 INTS11Q5TA45 600 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 CWF19L1Q69YN2 538 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 TXNDC11Q6PKC3 985 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 FIP1L1Q6UN15 594 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 GRASPQ7Z6J2 395 aaPredicted RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 MTDHQ86UE4 582 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 RHBDD1Q8TEB9 315 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 PPCDCQ96CD2 204 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 CCDC120Q96HB5 630 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 IRF2P14316 349 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 CDH5P33151 784 aaPredicted RBP10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 LIN54Q6MZP7 749 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF605Q86T29 641 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 HEPHQ9BQS7 1158 aa10.9□□□□□ -0.66
CACNA1C-216ENST00000399638 WHRNQ9P202 907 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms