RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 OR13F1Q8NGS4 319 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 FAM45AQ8TCE6 357 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 SH3YL1Q96HL8 342 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 TEKT5Q96M29 485 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 EHD1Q9H4M9 534 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 GIT1Q9Y2X7 761 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 MAP4K5Q9Y4K4 846 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 UBXN8O00124 270 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 LRIG2O94898 1065 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 LTA4HP09960 611 aaKnown RBP9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 IDO1P14902 403 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 AXLP30530 894 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 ICAM3P32942 547 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 NR4A2P43354 598 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 MTPNP58546 118 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 VBP1P61758 197 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 LAPTM4AQ15012 233 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 TECRLQ5HYJ1 363 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 ZNF773Q6PK81 442 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 CATSPERGQ6ZRH7 1159 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 LARP4Q71RC2 724 aaKnown RBP eCLIP9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 CCDC80Q76M96 950 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 ZDHHC17Q8IUH5 632 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 SCAIQ8N9R8 606 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 FLAD1Q8NFF5 587 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 TWIST2Q8WVJ9 160 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 BIRC7Q96CA5 298 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 ACOX2Q99424 681 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 ADAMTS10Q9H324 1103 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 NXF3Q9H4D5 531 aaKnown RBP9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 AS3MTQ9HBK9 375 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 ACTR3BQ9P1U1 418 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 MTRRQ9UBK8 725 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 SNX5Q9Y5X3 404 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 SYCE1LA8MT33 242 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 H0Y858 1186 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 ZNF701M0R085 212 aaPredicted RBP9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 FXYD1O00168 92 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 TSPAN3O60637 253 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 PIRTP0C851 137 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 BMP1P13497 986 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 HTR1BP28222 390 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 CA8P35219 290 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 TGFBR1P36897 503 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 ACADVLP49748 655 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 HK2P52789 917 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 OR4D2P58180 307 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 GALNT2Q10471 571 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 PAFAH1B3Q15102 231 aaKnown RBP9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 INAVAQ3KP66 663 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 ADCK1Q86TW2 530 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 SLC22A16Q86VW1 577 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 FIG4Q92562 907 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 TMBIM1Q969X1 311 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 GSTO2Q9H4Y5 243 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 WDCPQ9H6R7 721 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 SPC25Q9HBM1 224 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 GJD2Q9UKL4 321 aa9.83□□□□□ -0.84
PTCHD4-202ENST00000398738 AQP12BA6NM10 295 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 GGT5P36269 586 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 HADHAP40939 763 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 ATP6V0D1P61421 351 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 UFM1P61960 85 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 FOXD4Q12950 439 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 TNFAIP1Q13829 316 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 CATSPER4Q7RTX7 472 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 AQP12AQ8IXF9 295 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 KIAA2013Q8IYS2 634 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 RAB2BQ8WUD1 216 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 STARD8Q92502 1023 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 FAR2Q96K12 515 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 TBCDQ9BTW9 1192 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 RHOBTB2Q9BYZ6 727 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 TOR3AQ9H497 397 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 RBM22Q9NW64 420 aaKnown RBP eCLIP9.82□□□□□ -0.845e-7■■□□□ 12.6
PTCHD4-202ENST00000398738 INVSQ9Y283 1065 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 KCTD3Q9Y597 815 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 PCDHGA8Q9Y5G5 932 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 LTBP1Q14766 1721 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 CYP2C8P10632 490 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 CYP4B1P13584 511 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 KPNA2P52292 529 aaKnown RBP9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 KCNK10P57789 538 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 MAPRE1Q15691 268 aaKnown RBP9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 AAK1Q2M2I8 961 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 FBXO47Q5MNV8 452 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 FKBP1CQ5VVH2 108 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 GLYATQ6IB77 296 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 SPESP1Q6UW49 350 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 GADL1Q6ZQY3 521 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 RGL4Q8IZJ4 473 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 LGI2Q8N0V4 545 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 SPARTQ8N0X7 666 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 APPL2Q8NEU8 664 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 NDNFQ8TB73 568 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 BDH2Q9BUT1 245 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 KIFC1Q9BW19 673 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 HMG20AQ9NP66 347 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 CPA4Q9UI42 421 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 SCN1AP35498 2009 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms