RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TAL1P17542 331 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CA4P22748 312 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 RGS2P41220 211 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 RARRES1P49788 294 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 AP2S1P53680 142 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF33AQ06730 810 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 PITRM1Q5JRX3 1037 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 NOTUMQ6P988 496 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 DARS2Q6PI48 645 aaKnown RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 SIAH1Q8IUQ4 282 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 GPR65Q8IYL9 337 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 DAW1Q8N136 415 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CPA6Q8N4T0 437 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 FBXL6Q8N531 539 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 DTD1Q8TEA8 209 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 GAB3Q8WWW8 586 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 TNFRSF14Q92956 283 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 MAP6Q96JE9 813 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 TMEM74Q96NL1 305 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 DMRTA2Q96SC8 542 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 RAD9AQ99638 391 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 NEURL2Q9BR09 285 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 TASP1Q9H6P5 420 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 DHX33Q9H6R0 707 aaKnown RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 ERVMER34-1Q9H9K5 563 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 ATP13A2Q9NQ11 1180 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 RPL26L1Q9UNX3 145 aaKnown RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 ZHX2Q9Y6X8 837 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 GREB1LQ9C091 1923 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 A0A0U1RQV5 110 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 POC1B-GALNT4F8VUJ3 575 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 PPM1DO15297 605 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 TM9SF1O15321 606 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 PROSCO94903 275 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 TJP3O95049 919 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 POMCP01189 267 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC10A3P09131 477 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 SLURP2P0DP57 97 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 ITGB6P18564 788 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 TAC1P20366 129 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 YWHABP31946 246 aaKnown RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 LUMP51884 338 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 METAP1P53582 386 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 MAT1AQ00266 395 aaKnown RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CYP24A1Q07973 514 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 SLFN12LQ6IEE8 588 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 SUSD1Q6UWL2 747 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 NIPA1Q7RTP0 329 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 FAM131BQ86XD5 332 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CBWD2Q8IUF1 395 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CHERPQ8IWX8 916 aaKnown RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 MCOLN2Q8IZK6 566 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 ZCCHC9Q8N567 271 aaKnown RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC2A14Q8TDB8 520 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 PRCCQ92733 491 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 HPS1Q92902 700 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 FAR2Q96K12 515 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 APOL6Q9BWW8 343 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 GLIS2Q9BZE0 524 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 LRMDAQ9H2I8 198 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CMTM6Q9NX76 183 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 COQ4Q9Y3A0 265 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 AK5Q9Y6K8 562 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 LTBP2Q14767 1821 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 RNF103-CHMP3A0A140T963 221 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 HMX3A6NHT5 357 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 NT5C1B-RDH14C9J2C7 533 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 F8W036 122 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 RNF103O00237 685 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 WRBO00258 174 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 TOR1AO14656 332 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 IGFBP1P08833 259 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 GNAO1P09471 354 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CREB1P16220 341 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CYP2B6P20813 491 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 GMPSP49915 693 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 JAK3P52333 1124 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 PSMD4P55036 377 aaKnown RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 BCAR1P56945 870 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 NAA20P61599 178 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 RPA4Q13156 261 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 FLOT2Q14254 428 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 PRKD1Q15139 912 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 PAGE2BQ5JRK9 111 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 YOD1Q5VVQ6 348 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CENPUQ71F23 418 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 VANGL1Q8TAA9 524 aaPredicted RBP6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 RIPOR3Q96MK2 946 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 OR51V1Q9H2C8 321 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 KCNH7Q9NS40 1196 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 ADAM22Q9P0K1 906 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 FEM1BQ9UK73 627 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 TBX20Q9UMR3 447 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 GPR45Q9Y5Y3 372 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CHD9Q3L8U1 2897 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 A0A087WV62 115 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 UBE2CO00762 179 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TERTO14746 1132 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 HNRNPDLO14979 420 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms